Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2414 |
Symbol | |
ID | 5870203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2698462 |
End bp | 2700207 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547537 |
Product | hydantoinase B/oxoprolinase |
Protein accession | YP_001668649 |
Protein GI | 167033418 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.49373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACAG TAGATCCGAT CACCCTTGCG GTTGTCCGGG GTGCGCTGGA GACAGCGCAA CGCGAAATGA CCCTGACCCT GGAAAAGACC GGGCGCTCCA GTGTGTTCAA CCTGGCCCAC GACTATTCCA ACTCGCTGTT CGATCACCTG CCGGAAATGA TCCTGCAAGG CCAGGACATT CCCATCCACC TGGGTTCGCT GATCCCGGCC ATGAAATGCG TGGCCGAGTT CTTCGGCGAC GACATCGCAG AAGGCGACGT GATCTACCAC AACGACCCGG CCTACAAGGG CAGCCATATT CTCGACTGTT GCATGTACAA GCCGGTGTAC TACCAGGGCG AGTTGGTGTT CTGGACCGTG TGCAAAGGCC ACCTGACCGA CATCGGCGGC CCGGTGCCGG CTGGCTACAA CCCAGATGCC AAGGAAATCT ACGCCGAAGG CTTGCGCATT CCGCCGGTCA AGCTGTGGGA AAAGGGCAAA CGCCGTGAGG ACGTGATCAA CTTCATGCTC ACCAACATGC GCGCCCGGCC CTATCAGGAA GGCGACCTCA ATGCCCAGTA TGGCGCCTGC AAGGTCGGCG AGCGGCACTT GCTGGAACTG CTCGACAAGT ACGGCGTGGC GCAGGTGCGA GCCTGCATCG CCGAACTGAA GAACATGGCC GACCGGCACA TGCGCGCACT GTTGCGCGAT GTGCCGGACG GTGACTACAG CGGCACCGCC GTGCTCGAAG ATGCCGGCCA TGGCCTGGGC GAACTGGCCA TCACCGCCCA TGTACAGATA CGTGGCGACC AGGCCCACGT GCGCATCGAC AGCCCGCCGC AAGTGCCGTA CTTCATCAAT TCCTACGAGG GCAACTCGGT GTCGGGTGTG TACCTGGGGC TGATGATGTT CGCCCAGGTG GCGCCCCCCT ACAACGAAGG GCTGTACCGC TGCGTCACGG TCGATGTCGG GCCCAGAGGC ACGCTGTGCA ATGCCGAAGA ACCCGCACCC CACGTCAACT GCACCACCAC GCCGATGGAA ACCCTGGCCG ATGCCGTGCG CACCGCGCTG GAACAGGCTT CGCCACAGCG GGTAACGGCC TCCTGGGGGC ATACCAGCGG CATCAACATC GCCGGCCATG ACCCGCGCAA CGGCAACAGC GAGTACGTGA CCATGGTGCT GGCCTCGATC ATTTCCGGTG CCGGCGCCAA CAAGGTGATG GATGGCTGGC ACGCCTGCGG CCCGTTGTGC TGTTTCGGGG CGCTGATGAG CGGTGACATC GAGCTGCTCG AACACGCCTA CCCGGTGCTG ATCCACCGCT ACAGCCTGAT GGCCGACAGT TGTGGTGCCG GTGAATTCCG TGGCGGTTCG GGCACCCGCC TGGAGATCGA ACCACTGGAC CACGCCATGA CCGTGGTCGG CTTTGGCGAG GGCCGCCAAC TGCCCACCGC CGGTGCCGCC GGGGCACGCA ACGCATTGCT TGAGCCCAAG CTGGGCCGGC TGATCCATCG CCACGCCGAC GGCAGCGAAG ACCATTACAC GCAAAACCCC ATGCTCACCC TGCAACCAGG CGAACGCATC ATCAACGTCA ACCCCGGCGG TGGTGGCTAC GGCGACCCGC TGCGTCGCCC GGTCGCAGCC GTGCTGGAGG ATGTGCGCAA TGGCCTGGTC TCGCCACAAG GGGCAGCCCT GGAGTATGGC GTGGTCCTCG ATGACCAAGG CCACCTCGAC GAAACCGCCA CCCGCCTTGC CCGCGCCCCG CGCTGA
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Protein sequence | MQTVDPITLA VVRGALETAQ REMTLTLEKT GRSSVFNLAH DYSNSLFDHL PEMILQGQDI PIHLGSLIPA MKCVAEFFGD DIAEGDVIYH NDPAYKGSHI LDCCMYKPVY YQGELVFWTV CKGHLTDIGG PVPAGYNPDA KEIYAEGLRI PPVKLWEKGK RREDVINFML TNMRARPYQE GDLNAQYGAC KVGERHLLEL LDKYGVAQVR ACIAELKNMA DRHMRALLRD VPDGDYSGTA VLEDAGHGLG ELAITAHVQI RGDQAHVRID SPPQVPYFIN SYEGNSVSGV YLGLMMFAQV APPYNEGLYR CVTVDVGPRG TLCNAEEPAP HVNCTTTPME TLADAVRTAL EQASPQRVTA SWGHTSGINI AGHDPRNGNS EYVTMVLASI ISGAGANKVM DGWHACGPLC CFGALMSGDI ELLEHAYPVL IHRYSLMADS CGAGEFRGGS GTRLEIEPLD HAMTVVGFGE GRQLPTAGAA GARNALLEPK LGRLIHRHAD GSEDHYTQNP MLTLQPGERI INVNPGGGGY GDPLRRPVAA VLEDVRNGLV SPQGAALEYG VVLDDQGHLD ETATRLARAP R
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