Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2355 |
Symbol | |
ID | 5870144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2634353 |
End bp | 2635552 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641547479 |
Product | major facilitator transporter |
Protein accession | YP_001668591 |
Protein GI | 167033360 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.235883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCCT CCCTTGCGGC AGCGCAACCG GCAGCTGCCA GCCTGAGCCG GGCCCTGGTC GTGCTACTGG CATTCTGCTG CGGCGCGATC GTCGCCAACA TCTACTATGC CCAGCCCATC GTCGGGCTGA TTGCCCCAGA CTTGGGGCTA TCCACCGAGC ATGCCAGCCT GATCGTTTCC CTTACCCAAC TGGGTTATGC CCTGGGCCTG TTGTTGCTGG TGCCGCTGGC CGACCTGCTG GAAAACCGCC GCCTGATGGT GGCTACCGCT GTCCTGGCCT GTGTCAGCCT GCTGCTGGCG GGCACCAGCA GCAGTGGTCA AGGGCAGTTG TTCCTGGGTT ACGCACTGCT GATCGGTTTC AGTTCTGTGT CGGTGCAGAT GCTTATCCCG CTGGCGGCGC ACCTGGCGCC GGAACAGCAG CGTGGCCGGG TGGTGGGTAA TATCATGGGC GGCCTGCTGC TGGGTATCCT GCTGGCGCGC CCGGTTTCGA GCCTGGTGGC TGACCACTTT GGCTGGCGCG CGGTGTTCAT TGGCGCCGCC GGAGTCATGC TGGCGATCAT CCTGTTGCTG GCGCTGACCC TGCCGCAGCG TCGTCCCGAG CACAAGGCCA GCTATGCCGG GCTCATGCTG TCGCTGCTCA CTCTGCTGCG CCGTTATCCA CTGCTGCGCC AGCGTTCGTT GTACCAGGCG TTGATGTTCG CAGCGTTCAG CCTGTTCTGG ACGGCCGTGC CGATGGCCCT GGCCAGTGAA CACGGCCTGT CGCAGAGCCA TATCGCCGTG TTCGCCCTGG TCGGTGCAGT GGGCGCCATC GCTGCGCCCA TGGCCGGGCG CCTGGCGGAT GCCGGGCATG CCCGCGCCGG CTCGCTGTTG GCGCTGATGC TGGCGCCGGT GGCCTTGCTG CTGGGGCTAT CAAGCCCGGG TTACAGCGTG ATCGGCCTGG GCCTTACCGG CGTGCTGCTG GACTTTGCGG TGCAGATGAA CATGGTCATT GGCCAGCGCG AAGTGTACGC ACTGGACCCG GCCAGCCGCG GGCGGCTGAA CGCGGTGTAC ATGACCAGCA TCTTCCTTGG CGGGGCGCTG GGGTCGGCGG TGGCCAGCGC GTTGTTCAGC CAGTTTGGCT GGCAGGGGGT GGCGCTGGTG GGGGCAGGCT TGCCGGGTGT TGCGTTGCTG GTCTTCCTGC TGAAGGCCCG GCGCGCCTGA
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Protein sequence | MNPSLAAAQP AAASLSRALV VLLAFCCGAI VANIYYAQPI VGLIAPDLGL STEHASLIVS LTQLGYALGL LLLVPLADLL ENRRLMVATA VLACVSLLLA GTSSSGQGQL FLGYALLIGF SSVSVQMLIP LAAHLAPEQQ RGRVVGNIMG GLLLGILLAR PVSSLVADHF GWRAVFIGAA GVMLAIILLL ALTLPQRRPE HKASYAGLML SLLTLLRRYP LLRQRSLYQA LMFAAFSLFW TAVPMALASE HGLSQSHIAV FALVGAVGAI AAPMAGRLAD AGHARAGSLL ALMLAPVALL LGLSSPGYSV IGLGLTGVLL DFAVQMNMVI GQREVYALDP ASRGRLNAVY MTSIFLGGAL GSAVASALFS QFGWQGVALV GAGLPGVALL VFLLKARRA
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