| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2353 |
|---|
| Symbol | |
|---|
| ID | 5870142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2632878 |
|---|
| End bp | 2633228 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641547477 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001668589 |
|---|
| Protein GI | 167033358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.199358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACCGA ACAACCTGCT GGCCGCCCTG CCGCCCTGCG ACCCCGCCAG TGCCGAACAT
GTCGACGAAC TGCTCAGCCG CCCAGGGGTG CGCGTGGAGC GTATCGTCTC CAGCGGCCAG
GCCAGCCCGC CCGGTTTCTG GTACGACCAG GCCGAAGGCG AGTGGATCGT GCTGCTCAGT
GGAGCTGCGG GGCTGCGCTT CGAGCACGAG CACCACACCC GCCTGTTGGC GCCAGGCGAT
TGCCTGGATA TTCCGCCGCA CTACCGCCAC CGCGTGGAAT GGACCGCACC CGGCACGGCC
ACCATCTGGT TGGCGGTGTT CTATGGCAGT AGTTCCCCGT GGCCAGCCTG A
|
|---|
| Protein sequence | MIPNNLLAAL PPCDPASAEH VDELLSRPGV RVERIVSSGQ ASPPGFWYDQ AEGEWIVLLS
GAAGLRFEHE HHTRLLAPGD CLDIPPHYRH RVEWTAPGTA TIWLAVFYGS SSPWPA
|
|---|
| |