Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2299 |
Symbol | |
ID | 5870088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2562031 |
End bp | 2565021 |
Gene Length | 2991 bp |
Protein Length | 996 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641547424 |
Product | hypothetical protein |
Protein accession | YP_001668536 |
Protein GI | 167033305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.784864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.626231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATG CCTCCGTCAG CAGTGCCACC TCTGGTCCCG CCTGCAGTGC ACGCATCCCC ATCCTGCCAG TGCGCTATGC CATCGTGCCG CGCACCGGCG ACTCCCCCGC CTACCGCTAT GCCGACGCAG GCTTCAACCT CGAACAAGGC TTCGCCCCAC TGCAACACTC CGCCTACACC CTCCGCGCCC TGCGGCAGGG CTATGTCTAC GTGTTCATGA AAGGCCCGCT GGGCGAAAAG CTGGTCATCC ATGAGTACGT CGGCGCAGGC CTTTACAAGG AACTGCGCTA CCAAGGGCTG GAGAACTACC ACCTGCGTGA ACGCTACCTC TCCAGCCGCA CCCTGGGCTG GGTGTGGGCC GACACCTGCC CCGATACCGC CAAGGAAGTC TGGATCGGCT ACAGCCCACA CCTGTGGACC AACGCCATGA CCGCCCGCAT CACCGGTTCG CCTGCCCTGC GCAAACGGCA CATGCGCCAG TTGGACATGG CCGAACTGGT GAGCGGCAAC CAAGCTCCGT CCACCCAGCC CCATGTGCTG CCGGTCAGCG CCCTGCAAAC CTGGGTCGAA GACTTCAAAC CGCCCCACCG GCGCATGCCG CTGACCTGGA GCAGCGACCC GATCAGCGAA ATCCTGCCCA TCGGCAACCT CGTCGCCATG GCGCGGCACT ACCCCTACAC CCAGCCGAAA GTGCCGGTGG TGGTCGCGCT TGCCGACGCC GAAGGCATGG CCCTGGACCT GAGCCTGTCG GTCTCGGCCT ACCAGCATCA GCTGCGCGAC CTGATGCCCG CCGAGCAACT GGAGCACACC AAGCCCGCAC AACCGCCCGA GCAGGAGCGC GTGCCGGCGT GCTACCGGTT GGATGCCGAA CAACTGAGTG TGCAAAGCCG CGATTTCCAC CATCGCAACC TGGTGGCCAT GCTGCTGAAC AAGACGCTGG AAAGCATGTA CCCGGCGGAC GCCCCCTCAC CGGAACTGGC CGCGTTCCGG CTTGGCCTGG AGCGCCGGGG CCCCGCCCTG TCGCCGGCCG AATCGCAATT TCAGGCGCTC ACCCACAAGG ACTACTCGCC CCACGGCGCA CGCCTGGCAC AGCGCCTCGA TGTCGAGAAA TACCGGCGTT TTCTCGCCGA GCGCGATGAA CTGGAACGGC GCATTGCCGC CCTGCGCAAC CAAGCCTTGC AAGCCAGCAA CGATCACGAC GCCTGGCTGG CGACGGCCGA ACCCCAACAC ATCGATAACC CCTACAGCCT GGCCGCCGCC TTGGCCTGTT ACGACCGTGA CGAAATCACT TCCGCCCGCG GGCTGGAAAT ATCCTCGGCG TTGCTGATTC AGCCGATGGG CCAGCCGGCC CCTGGCACCG AGGAACAGGA TCGACGCTTC AAACGCCTGG AACAATGGCT CGATCAACAC GACAGCCCGC TGTACACCGC CCTGGCACCG TTCAATTCGT TCAAGGACAA GGCCGACGCG ATCGGCAGTT TGCTCGGCGC CAGCGATAAC GTGATCGAAG GCTTGGCCGG CCGCTTTCCG GCCATGGCCG GCATCACCGA CCTCACCGCC CAGACGGTCA ATACCGTGGT GCTCAAGCGC CTGCGCGGGC AAACCCGCTG GGATGCCAGC CATGGCCTGC GCCAGCAGGT GTTGATGGCG GCGCGTGAAG GGAATGCCGA GAAAGCGCTG GGGCTGTTGG CAGCGCGCTA CCGGATCACC AACCAGGCCA TCACGGACAA TCCGTTCAGC CAGGAGGTAC AGAAGTATTT GAAGAGCGGC ATGGCGCAGG TAGAGGAGAT GAAAGCGCTG CGCATCTCGG GTAGCCGAAA CGTGCTGATC GAGCTGACCA CTACCGCGCG GGTGAAACCT AACTTTCTCG GCTTGCTTAC CGCGGGCGGT GGCGGTGGTT TTAACGCAGG CATGCTGTGG TTCAACATCT TATCGCTCAA GACGGCCTAC AACAGCCTGC AGAAGAGCAA TGCACCGGAA TACACCTTGG GCTTTGCTTC ATCGATATTC GGGGTGATCG GTGCAGCGGC AGCCACAATG GTCAGCGTTC GGGCAACGCA GAAGGCGGTG ATGCTGCGAT TAAGCTCGAC AGCACCGGGG ATGGCGTTTG GCAACGGGGT TATCAGGTTC TTAAGCAGTA ACCTTTTCGC GCGTTTAACA GGATACCCCG CAATAGTATT TGGTTTTTTC GCTGACCTTG CTAAGGCACT GCGGCAGAAC AACAACGGCA ATCTAACTGC AGCCAGTTAC ACGATGGCCG GTGGCTTTAC CATGGCTATT GGTTCCGCTG TCGTCCTTGA AGCAGGACTT GCAGTTGCGG GCGTGACATC AGTTGTGCCG TTCGCCGGAT GGGCCGCAGC GGCCCTTGTA CTTGTAGGCG TCGCCATCAT TGGAGCAGGC CTGTACCTAC ACGCCAAGGC ACATGAGCAC CTTCATAGCC CAATTGAGTT GTGGGTAGCA CGTAGCATCT TCGGCAATCG TATTAATGAC GGAGAGGAGC GTCCTGACAT CACGTTGGAC TATGTGAAGA AACTGCCTGC TTTCGCCTCA CTACCAACGG AAGTCAAAGC CTGGCACAAC GAGCATTACG GGCCAAAACT ACTATCCGCC AAACAGGCCC TGTCACTCGG CGTAACTCAT GTCGACACTA GGTGGCATCA GAACAATCAT TGGTCTCCGC CAAACTGGAT AGCGATTACA CATAACGAAG TAGTCGCACC TCAGCCAACC GTTGAGTTTA CAGTGCTGCT ACCTGGTTTT GTACTTGGGG TAAGCGAATG GTCAGGAAGC TTAAAAGCCC ACCGTGATGA CCAAGGAAGG GACGTGCTTC CAATTACCCC GACTGGCTAC ATCGTAGGTG CTGGCTTGGT TCTTCACTTC GAAAACACGC TAGCTAGCCA AAAATATGTC TCACTGCATC TAACTTACAA CGCCAATCAA GGCCTGGACG AGAACAATGA GATCCTGTCA ACTTTTCATC TGGAGCGCTG A
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Protein sequence | MSNASVSSAT SGPACSARIP ILPVRYAIVP RTGDSPAYRY ADAGFNLEQG FAPLQHSAYT LRALRQGYVY VFMKGPLGEK LVIHEYVGAG LYKELRYQGL ENYHLRERYL SSRTLGWVWA DTCPDTAKEV WIGYSPHLWT NAMTARITGS PALRKRHMRQ LDMAELVSGN QAPSTQPHVL PVSALQTWVE DFKPPHRRMP LTWSSDPISE ILPIGNLVAM ARHYPYTQPK VPVVVALADA EGMALDLSLS VSAYQHQLRD LMPAEQLEHT KPAQPPEQER VPACYRLDAE QLSVQSRDFH HRNLVAMLLN KTLESMYPAD APSPELAAFR LGLERRGPAL SPAESQFQAL THKDYSPHGA RLAQRLDVEK YRRFLAERDE LERRIAALRN QALQASNDHD AWLATAEPQH IDNPYSLAAA LACYDRDEIT SARGLEISSA LLIQPMGQPA PGTEEQDRRF KRLEQWLDQH DSPLYTALAP FNSFKDKADA IGSLLGASDN VIEGLAGRFP AMAGITDLTA QTVNTVVLKR LRGQTRWDAS HGLRQQVLMA AREGNAEKAL GLLAARYRIT NQAITDNPFS QEVQKYLKSG MAQVEEMKAL RISGSRNVLI ELTTTARVKP NFLGLLTAGG GGGFNAGMLW FNILSLKTAY NSLQKSNAPE YTLGFASSIF GVIGAAAATM VSVRATQKAV MLRLSSTAPG MAFGNGVIRF LSSNLFARLT GYPAIVFGFF ADLAKALRQN NNGNLTAASY TMAGGFTMAI GSAVVLEAGL AVAGVTSVVP FAGWAAAALV LVGVAIIGAG LYLHAKAHEH LHSPIELWVA RSIFGNRIND GEERPDITLD YVKKLPAFAS LPTEVKAWHN EHYGPKLLSA KQALSLGVTH VDTRWHQNNH WSPPNWIAIT HNEVVAPQPT VEFTVLLPGF VLGVSEWSGS LKAHRDDQGR DVLPITPTGY IVGAGLVLHF ENTLASQKYV SLHLTYNANQ GLDENNEILS TFHLER
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