Gene PputGB1_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2299 
Symbol 
ID5870088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2562031 
End bp2565021 
Gene Length2991 bp 
Protein Length996 aa 
Translation table11 
GC content60% 
IMG OID641547424 
Producthypothetical protein 
Protein accessionYP_001668536 
Protein GI167033305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.784864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.626231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG CCTCCGTCAG CAGTGCCACC TCTGGTCCCG CCTGCAGTGC ACGCATCCCC 
ATCCTGCCAG TGCGCTATGC CATCGTGCCG CGCACCGGCG ACTCCCCCGC CTACCGCTAT
GCCGACGCAG GCTTCAACCT CGAACAAGGC TTCGCCCCAC TGCAACACTC CGCCTACACC
CTCCGCGCCC TGCGGCAGGG CTATGTCTAC GTGTTCATGA AAGGCCCGCT GGGCGAAAAG
CTGGTCATCC ATGAGTACGT CGGCGCAGGC CTTTACAAGG AACTGCGCTA CCAAGGGCTG
GAGAACTACC ACCTGCGTGA ACGCTACCTC TCCAGCCGCA CCCTGGGCTG GGTGTGGGCC
GACACCTGCC CCGATACCGC CAAGGAAGTC TGGATCGGCT ACAGCCCACA CCTGTGGACC
AACGCCATGA CCGCCCGCAT CACCGGTTCG CCTGCCCTGC GCAAACGGCA CATGCGCCAG
TTGGACATGG CCGAACTGGT GAGCGGCAAC CAAGCTCCGT CCACCCAGCC CCATGTGCTG
CCGGTCAGCG CCCTGCAAAC CTGGGTCGAA GACTTCAAAC CGCCCCACCG GCGCATGCCG
CTGACCTGGA GCAGCGACCC GATCAGCGAA ATCCTGCCCA TCGGCAACCT CGTCGCCATG
GCGCGGCACT ACCCCTACAC CCAGCCGAAA GTGCCGGTGG TGGTCGCGCT TGCCGACGCC
GAAGGCATGG CCCTGGACCT GAGCCTGTCG GTCTCGGCCT ACCAGCATCA GCTGCGCGAC
CTGATGCCCG CCGAGCAACT GGAGCACACC AAGCCCGCAC AACCGCCCGA GCAGGAGCGC
GTGCCGGCGT GCTACCGGTT GGATGCCGAA CAACTGAGTG TGCAAAGCCG CGATTTCCAC
CATCGCAACC TGGTGGCCAT GCTGCTGAAC AAGACGCTGG AAAGCATGTA CCCGGCGGAC
GCCCCCTCAC CGGAACTGGC CGCGTTCCGG CTTGGCCTGG AGCGCCGGGG CCCCGCCCTG
TCGCCGGCCG AATCGCAATT TCAGGCGCTC ACCCACAAGG ACTACTCGCC CCACGGCGCA
CGCCTGGCAC AGCGCCTCGA TGTCGAGAAA TACCGGCGTT TTCTCGCCGA GCGCGATGAA
CTGGAACGGC GCATTGCCGC CCTGCGCAAC CAAGCCTTGC AAGCCAGCAA CGATCACGAC
GCCTGGCTGG CGACGGCCGA ACCCCAACAC ATCGATAACC CCTACAGCCT GGCCGCCGCC
TTGGCCTGTT ACGACCGTGA CGAAATCACT TCCGCCCGCG GGCTGGAAAT ATCCTCGGCG
TTGCTGATTC AGCCGATGGG CCAGCCGGCC CCTGGCACCG AGGAACAGGA TCGACGCTTC
AAACGCCTGG AACAATGGCT CGATCAACAC GACAGCCCGC TGTACACCGC CCTGGCACCG
TTCAATTCGT TCAAGGACAA GGCCGACGCG ATCGGCAGTT TGCTCGGCGC CAGCGATAAC
GTGATCGAAG GCTTGGCCGG CCGCTTTCCG GCCATGGCCG GCATCACCGA CCTCACCGCC
CAGACGGTCA ATACCGTGGT GCTCAAGCGC CTGCGCGGGC AAACCCGCTG GGATGCCAGC
CATGGCCTGC GCCAGCAGGT GTTGATGGCG GCGCGTGAAG GGAATGCCGA GAAAGCGCTG
GGGCTGTTGG CAGCGCGCTA CCGGATCACC AACCAGGCCA TCACGGACAA TCCGTTCAGC
CAGGAGGTAC AGAAGTATTT GAAGAGCGGC ATGGCGCAGG TAGAGGAGAT GAAAGCGCTG
CGCATCTCGG GTAGCCGAAA CGTGCTGATC GAGCTGACCA CTACCGCGCG GGTGAAACCT
AACTTTCTCG GCTTGCTTAC CGCGGGCGGT GGCGGTGGTT TTAACGCAGG CATGCTGTGG
TTCAACATCT TATCGCTCAA GACGGCCTAC AACAGCCTGC AGAAGAGCAA TGCACCGGAA
TACACCTTGG GCTTTGCTTC ATCGATATTC GGGGTGATCG GTGCAGCGGC AGCCACAATG
GTCAGCGTTC GGGCAACGCA GAAGGCGGTG ATGCTGCGAT TAAGCTCGAC AGCACCGGGG
ATGGCGTTTG GCAACGGGGT TATCAGGTTC TTAAGCAGTA ACCTTTTCGC GCGTTTAACA
GGATACCCCG CAATAGTATT TGGTTTTTTC GCTGACCTTG CTAAGGCACT GCGGCAGAAC
AACAACGGCA ATCTAACTGC AGCCAGTTAC ACGATGGCCG GTGGCTTTAC CATGGCTATT
GGTTCCGCTG TCGTCCTTGA AGCAGGACTT GCAGTTGCGG GCGTGACATC AGTTGTGCCG
TTCGCCGGAT GGGCCGCAGC GGCCCTTGTA CTTGTAGGCG TCGCCATCAT TGGAGCAGGC
CTGTACCTAC ACGCCAAGGC ACATGAGCAC CTTCATAGCC CAATTGAGTT GTGGGTAGCA
CGTAGCATCT TCGGCAATCG TATTAATGAC GGAGAGGAGC GTCCTGACAT CACGTTGGAC
TATGTGAAGA AACTGCCTGC TTTCGCCTCA CTACCAACGG AAGTCAAAGC CTGGCACAAC
GAGCATTACG GGCCAAAACT ACTATCCGCC AAACAGGCCC TGTCACTCGG CGTAACTCAT
GTCGACACTA GGTGGCATCA GAACAATCAT TGGTCTCCGC CAAACTGGAT AGCGATTACA
CATAACGAAG TAGTCGCACC TCAGCCAACC GTTGAGTTTA CAGTGCTGCT ACCTGGTTTT
GTACTTGGGG TAAGCGAATG GTCAGGAAGC TTAAAAGCCC ACCGTGATGA CCAAGGAAGG
GACGTGCTTC CAATTACCCC GACTGGCTAC ATCGTAGGTG CTGGCTTGGT TCTTCACTTC
GAAAACACGC TAGCTAGCCA AAAATATGTC TCACTGCATC TAACTTACAA CGCCAATCAA
GGCCTGGACG AGAACAATGA GATCCTGTCA ACTTTTCATC TGGAGCGCTG A
 
Protein sequence
MSNASVSSAT SGPACSARIP ILPVRYAIVP RTGDSPAYRY ADAGFNLEQG FAPLQHSAYT 
LRALRQGYVY VFMKGPLGEK LVIHEYVGAG LYKELRYQGL ENYHLRERYL SSRTLGWVWA
DTCPDTAKEV WIGYSPHLWT NAMTARITGS PALRKRHMRQ LDMAELVSGN QAPSTQPHVL
PVSALQTWVE DFKPPHRRMP LTWSSDPISE ILPIGNLVAM ARHYPYTQPK VPVVVALADA
EGMALDLSLS VSAYQHQLRD LMPAEQLEHT KPAQPPEQER VPACYRLDAE QLSVQSRDFH
HRNLVAMLLN KTLESMYPAD APSPELAAFR LGLERRGPAL SPAESQFQAL THKDYSPHGA
RLAQRLDVEK YRRFLAERDE LERRIAALRN QALQASNDHD AWLATAEPQH IDNPYSLAAA
LACYDRDEIT SARGLEISSA LLIQPMGQPA PGTEEQDRRF KRLEQWLDQH DSPLYTALAP
FNSFKDKADA IGSLLGASDN VIEGLAGRFP AMAGITDLTA QTVNTVVLKR LRGQTRWDAS
HGLRQQVLMA AREGNAEKAL GLLAARYRIT NQAITDNPFS QEVQKYLKSG MAQVEEMKAL
RISGSRNVLI ELTTTARVKP NFLGLLTAGG GGGFNAGMLW FNILSLKTAY NSLQKSNAPE
YTLGFASSIF GVIGAAAATM VSVRATQKAV MLRLSSTAPG MAFGNGVIRF LSSNLFARLT
GYPAIVFGFF ADLAKALRQN NNGNLTAASY TMAGGFTMAI GSAVVLEAGL AVAGVTSVVP
FAGWAAAALV LVGVAIIGAG LYLHAKAHEH LHSPIELWVA RSIFGNRIND GEERPDITLD
YVKKLPAFAS LPTEVKAWHN EHYGPKLLSA KQALSLGVTH VDTRWHQNNH WSPPNWIAIT
HNEVVAPQPT VEFTVLLPGF VLGVSEWSGS LKAHRDDQGR DVLPITPTGY IVGAGLVLHF
ENTLASQKYV SLHLTYNANQ GLDENNEILS TFHLER