| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2281 |
|---|
| Symbol | |
|---|
| ID | 5870070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2543836 |
|---|
| End bp | 2544042 |
|---|
| Gene Length | 207 bp |
|---|
| Protein Length | 68 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641547406 |
|---|
| Product | 4-oxalocrotonate tautomerase |
|---|
| Protein accession | YP_001668518 |
|---|
| Protein GI | 167033287 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog |
|---|
| TIGRFAM ID | [TIGR00013] 4-oxalocrotonate tautomerase family enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.680097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.165271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTATG TCCATATTCG CGTAACCGAT GAAGGGGTGA GCGCTGAGCA CAAGCGCCAG
TTGATCGAAC AGACGACCCG TATGCTGCAG GAGGTGCTGG GGAAGCCGCC TGCCAGCACC
TTTGTGGTGA TCGAGGAGGT GCCAACCGAT AACTGGGGTG TCGGTGGCGA GACCGTGACC
GCAGTCCGGG CGCGAGAGCG GCGTTGA
|
|---|
| Protein sequence | MPYVHIRVTD EGVSAEHKRQ LIEQTTRMLQ EVLGKPPAST FVVIEEVPTD NWGVGGETVT
AVRARERR
|
|---|
| |