| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2211 |
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| Symbol | |
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| ID | 5870000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2469113 |
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| End bp | 2469853 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547336 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001668448 |
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| Protein GI | 167033217 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.958855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAG TCGCATTGGT AACCGGCGCC GGCCAGGGCC TGGGCCAGCG TTTCTGCGCC
CGGCTGCTGG CCGCAGGCTT CGACGTAGTG GTCTCGGACC GTGACCTGGC ACTTGCCCAG
GCCACTGCCG AGCAGCTGCA AGGGCAGGCT GGACGCACGT TGGCGGTAAA GCTGGATGTC
GCCAGCAAGG CCGATTTCGA GCAGGCCCTG GCCCAGGTGC TTGAGCGCTT CGGCGGCTTG
CACGTGGTGG TGAACAACGC CGCCGTGACC AGGATCACGC CGCTGATGCA GATCAGCCCG
GAAGAGTTCG ACGCCGTGGT CGGCCTGAAC TTGCGCAGCG TGTTCCTCGG CTGCCAGGTG
TTCGGCGCGT ACCTGGCCGA GGCCGGTTAC GGGCGGATCA TCAACATGGC TTCGCTGGCA
GGGCAAAACG GCGGCACGGC CACCGGCGCG CACTATGCGG CGAGCAAGGG CGCGATCATC
ACCCTGACCA AGGTGTTTGC CAAGGAGTTT GCCGCTCGCG GCGTTACCGT CAATGCCATC
GCCCCGGGCC CTGTCGACTC GCCAGCGGTG CATGCCGCGG TGCCGGTCGA ACGGCTGCCG
GGCCTTCTGG CCAACATTCC GGTACAGCGC CTGGGGGATG CCGACTTTCT GGGTGACCTG
ATCGTGCAAC TGGCACGGCC CGAGGCCTAT TTCACCACCG GGGCGACCTG GGATGTGAAC
GGCGGCTTGT TCATGCGTTG A
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| Protein sequence | MNQVALVTGA GQGLGQRFCA RLLAAGFDVV VSDRDLALAQ ATAEQLQGQA GRTLAVKLDV
ASKADFEQAL AQVLERFGGL HVVVNNAAVT RITPLMQISP EEFDAVVGLN LRSVFLGCQV
FGAYLAEAGY GRIINMASLA GQNGGTATGA HYAASKGAII TLTKVFAKEF AARGVTVNAI
APGPVDSPAV HAAVPVERLP GLLANIPVQR LGDADFLGDL IVQLARPEAY FTTGATWDVN
GGLFMR
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