Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2152 |
Symbol | |
ID | 5869941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2398661 |
End bp | 2399857 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641547277 |
Product | major facilitator transporter |
Protein accession | YP_001668389 |
Protein GI | 167033158 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2807] Cyanate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0222111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCTG CCTTGAACCT GTTGCTGGTG ATTTTGCTGG CGCTGAACTT GCGGCCGATC CTGACCAGTA TCGGCCCGTT ACTCGAACCC ATGCGCGCCA GCACCGGCCT GGGCTACCAG CAGGCCGCCT TGCTGACGGC ATTACCGGTG CTGTGCATGG GCCTGGTGCC GTTGCTGCAA CCGTGGCTGC GACGCTGGGT CAGCGAACAT GGCGGTATGC TCGGGGGCCT GGCCGCGATT GCCCTGGCCT GCCTGTGGCG CCTGCAGCTG GACAGTGCCT GGGCGCTGAT CGCCAGTGCG GTGGTCGCCG GCCTGGGCGT GGCAGTGGTG CAGGGCATGA TGCCGGGCCT GGTCAACCGC TGGTTCCCCG GGCGTTTGGC TGGGGCGATG GGCTTGTATT CGGCCGCGCT GATGAGCGGC GGCGGCCTGG CTGCAGTGCT CGGGCCACAC ATCAGCGGCC ATTTCGGTCA CTGGCAAGCC GGCCTGGGCC TGTGGGCGAT CCCGGCAGTG CTGGCGGTGC TGGCCTGGGC CGTGCTGCGG CCGCGCCAGG AAGCGCCGAA GTTGGCGGGG GCTACTGGCG GGCATTGGTT CGGCACCCGC CGGGCGTGGT TGCTGGCCCT GTACTTCGGC CTGATCAACG GCGGCTACAC CAGCATGGTG GCCTGGTTGC CGGCTTACCA CACCGAGCAC GGCGGCAGCG CCCAGGGCGG TGCCGATCTG GTGGGCCTGA TGACCGTGTT CCAGGTGGCA GGTGCGCTCG GCCTGCCGCT GCTGTTGCGG CGTTGGGCCG ACCGGCGCCC AGGCCTGTGG CTGGCGCTGG CAATCCAGCT GGCGGGATTC CTCGGCCTGC TGCTGGTACC TACGCAGGCT TCGGGGCTGT GGGTAGCCAT GATCGGTTTT GGACTGGGCG CCTGCTTCAG CCAAAGCCTG ACGCTGACCC TGGAGCACCT GAAAACGCCT GCCGAGGCGG GCAGCCTGGC GGCGTTCGTG CAGGGCATCG GCTTTATCAT CACCGGTATC GTGCCGTACA TCACCGGCTG GCTGCGTGAT GTCAGTGGCG ACTTCCAGGC TTCTTGGACG CTGCTGACCG TGACTGTTCT GGCAATGTTG CTGGTGACCG TGTGCTTCAA CCCGCGTGGC TATGCGGCGG CCATCGCCCG CCCGGCGGTA ATGGGCAAGG CCGCGCCGGT CAACTGA
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Protein sequence | MRAALNLLLV ILLALNLRPI LTSIGPLLEP MRASTGLGYQ QAALLTALPV LCMGLVPLLQ PWLRRWVSEH GGMLGGLAAI ALACLWRLQL DSAWALIASA VVAGLGVAVV QGMMPGLVNR WFPGRLAGAM GLYSAALMSG GGLAAVLGPH ISGHFGHWQA GLGLWAIPAV LAVLAWAVLR PRQEAPKLAG ATGGHWFGTR RAWLLALYFG LINGGYTSMV AWLPAYHTEH GGSAQGGADL VGLMTVFQVA GALGLPLLLR RWADRRPGLW LALAIQLAGF LGLLLVPTQA SGLWVAMIGF GLGACFSQSL TLTLEHLKTP AEAGSLAAFV QGIGFIITGI VPYITGWLRD VSGDFQASWT LLTVTVLAML LVTVCFNPRG YAAAIARPAV MGKAAPVN
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