Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2148 |
Symbol | |
ID | 5869937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2394782 |
End bp | 2395630 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547273 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_001668385 |
Protein GI | 167033154 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.504539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00391701 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCATTG AACAGATCGC CGTGATCGGC GCCGGCACCA TGGGCAACGG CATTGCCCAG GTGTGCGCGG TCGCCGGCTA CCAGGTGCTG TTGGTGGATG TTTCCGACGC TGCGCTGGAG CGCGGTGTGG CCACCTTGAG CAAAAACCTG GAACGCCAGG TCAGCAAGGG CACCCTGGAA GCGGACAAGG CGGTGGCGGC GAAAGCACGC ATCCGCACCA GCACCGACTA CACCCAGCTC AGCAGTGCGC AGCTGGTGAT CGAGGCCGCC ACCGAGAACC TGCAGCTCAA GCAGCGCATC CTGCAACAAG TGGCCGCCAA CGTCGCCGCC GACTGCCTGA TCGCCACCAA TACCTCGTCG CTGTCGGTCA CCCAGCTGGC CGCCAGCATC GAACACCCCG AGCGCTTCAT TGGCGTGCAC TTCTTCAACC CGGTGCCAAT GATGGCGCTG GTCGAGATCA TTCGCGGCCT GCAGACCAGC GACAGCACCT ACGCACAGGC GCTGGTGGTG ACCGAAAAAG TCGGCAAGAC GCCGATCACC GCTGGCAACC GCCCAGGCTT CGTGGTCAAC CGCATCCTGG TGCCGATGAT CAACGAGGCG ATCTTCGTGC GCCAGGAAGG CCTGGCCAGT GCCGAGGACA TCGACACCGG CATGCGCCTG GGCTGCAACC AGCCGATCGG CCCTCTGGCC CTGGCCGACC TGATTGGCCT GGATACCCTG CTGGCGATCA TGGAGGCCTT CCATGAAGGC TTCAACGACA GCAAGTATCG TCCTGCCCCG CTGCTCAAGG AAATGGTCGC GGCCGGTTGG CTGGGGCGCA AGAGCGGTCG CGGTTTCTTC ACTTACTGA
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Protein sequence | MSIEQIAVIG AGTMGNGIAQ VCAVAGYQVL LVDVSDAALE RGVATLSKNL ERQVSKGTLE ADKAVAAKAR IRTSTDYTQL SSAQLVIEAA TENLQLKQRI LQQVAANVAA DCLIATNTSS LSVTQLAASI EHPERFIGVH FFNPVPMMAL VEIIRGLQTS DSTYAQALVV TEKVGKTPIT AGNRPGFVVN RILVPMINEA IFVRQEGLAS AEDIDTGMRL GCNQPIGPLA LADLIGLDTL LAIMEAFHEG FNDSKYRPAP LLKEMVAAGW LGRKSGRGFF TY
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