Gene PputGB1_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2148 
Symbol 
ID5869937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2394782 
End bp2395630 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content64% 
IMG OID641547273 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001668385 
Protein GI167033154 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.504539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00391701 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATTG AACAGATCGC CGTGATCGGC GCCGGCACCA TGGGCAACGG CATTGCCCAG 
GTGTGCGCGG TCGCCGGCTA CCAGGTGCTG TTGGTGGATG TTTCCGACGC TGCGCTGGAG
CGCGGTGTGG CCACCTTGAG CAAAAACCTG GAACGCCAGG TCAGCAAGGG CACCCTGGAA
GCGGACAAGG CGGTGGCGGC GAAAGCACGC ATCCGCACCA GCACCGACTA CACCCAGCTC
AGCAGTGCGC AGCTGGTGAT CGAGGCCGCC ACCGAGAACC TGCAGCTCAA GCAGCGCATC
CTGCAACAAG TGGCCGCCAA CGTCGCCGCC GACTGCCTGA TCGCCACCAA TACCTCGTCG
CTGTCGGTCA CCCAGCTGGC CGCCAGCATC GAACACCCCG AGCGCTTCAT TGGCGTGCAC
TTCTTCAACC CGGTGCCAAT GATGGCGCTG GTCGAGATCA TTCGCGGCCT GCAGACCAGC
GACAGCACCT ACGCACAGGC GCTGGTGGTG ACCGAAAAAG TCGGCAAGAC GCCGATCACC
GCTGGCAACC GCCCAGGCTT CGTGGTCAAC CGCATCCTGG TGCCGATGAT CAACGAGGCG
ATCTTCGTGC GCCAGGAAGG CCTGGCCAGT GCCGAGGACA TCGACACCGG CATGCGCCTG
GGCTGCAACC AGCCGATCGG CCCTCTGGCC CTGGCCGACC TGATTGGCCT GGATACCCTG
CTGGCGATCA TGGAGGCCTT CCATGAAGGC TTCAACGACA GCAAGTATCG TCCTGCCCCG
CTGCTCAAGG AAATGGTCGC GGCCGGTTGG CTGGGGCGCA AGAGCGGTCG CGGTTTCTTC
ACTTACTGA
 
Protein sequence
MSIEQIAVIG AGTMGNGIAQ VCAVAGYQVL LVDVSDAALE RGVATLSKNL ERQVSKGTLE 
ADKAVAAKAR IRTSTDYTQL SSAQLVIEAA TENLQLKQRI LQQVAANVAA DCLIATNTSS
LSVTQLAASI EHPERFIGVH FFNPVPMMAL VEIIRGLQTS DSTYAQALVV TEKVGKTPIT
AGNRPGFVVN RILVPMINEA IFVRQEGLAS AEDIDTGMRL GCNQPIGPLA LADLIGLDTL
LAIMEAFHEG FNDSKYRPAP LLKEMVAAGW LGRKSGRGFF TY