Gene PputGB1_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2141 
Symbol 
ID5869930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2386939 
End bp2387289 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content61% 
IMG OID641547266 
Productresponse regulator receiver protein 
Protein accessionYP_001668378 
Protein GI167033147 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.217748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000119554 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACCTTC TGGTAGTCGA AGACGACGAC ATCGTCCGTA TGCTGATGGT CGAAGTGCTC 
GACGAACTGG GCTACAACGT CATCGAGGCA GAAGACGCCG CGGCCGCCCT GCGGGTACTC
GAAGACCCGA ACCAGGCGCT GGCACTGATG ATGACCGATG TGGGCTTGCC GGACATGCGA
GGCGAGTTAC TGGCGGGGAA AGCACGCGAA CTGCGGCCGC TGTTGCCCGT GCTGTTCGCC
AGTGGCTATG CCGACAGCTT CAATGTGCCC GAAGGCATGC ACCTGATCGG CAAGCCGTTC
AGCATCGACC AGTTGCGGGA CAAGGTGGTG GCTATTCTGG GTAACCCTTG A
 
Protein sequence
MHLLVVEDDD IVRMLMVEVL DELGYNVIEA EDAAAALRVL EDPNQALALM MTDVGLPDMR 
GELLAGKARE LRPLLPVLFA SGYADSFNVP EGMHLIGKPF SIDQLRDKVV AILGNP