Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2141 |
Symbol | |
ID | 5869930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2386939 |
End bp | 2387289 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547266 |
Product | response regulator receiver protein |
Protein accession | YP_001668378 |
Protein GI | 167033147 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.217748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000119554 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACCTTC TGGTAGTCGA AGACGACGAC ATCGTCCGTA TGCTGATGGT CGAAGTGCTC GACGAACTGG GCTACAACGT CATCGAGGCA GAAGACGCCG CGGCCGCCCT GCGGGTACTC GAAGACCCGA ACCAGGCGCT GGCACTGATG ATGACCGATG TGGGCTTGCC GGACATGCGA GGCGAGTTAC TGGCGGGGAA AGCACGCGAA CTGCGGCCGC TGTTGCCCGT GCTGTTCGCC AGTGGCTATG CCGACAGCTT CAATGTGCCC GAAGGCATGC ACCTGATCGG CAAGCCGTTC AGCATCGACC AGTTGCGGGA CAAGGTGGTG GCTATTCTGG GTAACCCTTG A
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Protein sequence | MHLLVVEDDD IVRMLMVEVL DELGYNVIEA EDAAAALRVL EDPNQALALM MTDVGLPDMR GELLAGKARE LRPLLPVLFA SGYADSFNVP EGMHLIGKPF SIDQLRDKVV AILGNP
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