Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2140 |
Symbol | |
ID | 5869929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2386174 |
End bp | 2386923 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547265 |
Product | precorrin 6A synthase |
Protein accession | YP_001668377 |
Protein GI | 167033146 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2243] Precorrin-2 methylase |
TIGRFAM ID | [TIGR02434] precorrin-6A synthase (deacetylating) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.1822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0000632781 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGACC TGTTGTTGAT CGGCATCGGC GCGGGTGACC CGCGCCAGGT CACTTATGAG GCAGTCGACG CGCTGCGTAG CGCTTGCGTG TTCTTCGTGC TCGACAAGGG CCGCGACAAG GATGACCTGG TGCAACTGCG CAAGGCAATT CTGCAACGCT ACCGTCCCGA GGGCGGTTAC CGCCTGGTGC AGGTGGCCGA CCCTGTGCGC GATGGTCAGG CGGATGACTA CCAGGGCGCG GTGCACGACT GGCACCGGCA GCGCGCTGTG CTGTATGCCC AACTGATCGA GCAGGAAATT GGCGACGGGG AGACTGGCGC CTTTTTGCTG TGGGGCGAGC CGACCCTGTA TGACAGCACC CTGCGTATTC TCGACCTGGT CCGCGAGCGC GGCGTGGCGC TGCGCCTGCA GGTAGTCCCT GGCATCAGCA GCGTTCAGGC TCTGGCAGCG CGCCACCAAG TGCCGCTCAA CCGCATTGGT GAGCCGCTGA CCGTGCTGCC GGGGCGGCGA CTGGGCGGGC ATGGGCCTAT CGACAATGTT GTGGTGATGC TCGACGGGCA AAGCGCGTTC GCCCTGCTCG ATGACCCGGC GTTGATGATC TATTGGGGCG CGTACCTGGG GACGGAGGAC GAGGTACTGA TTGCCGGGCC ATTGCAGGCA GTGAAGGCGC AAATACTGCA AGTGCGTGAG CGGGAGCGGC TGCGCAAGGG GTGGATCATG GACACCTACC TCTTGCGCAG GGCGCTGTAG
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Protein sequence | MKDLLLIGIG AGDPRQVTYE AVDALRSACV FFVLDKGRDK DDLVQLRKAI LQRYRPEGGY RLVQVADPVR DGQADDYQGA VHDWHRQRAV LYAQLIEQEI GDGETGAFLL WGEPTLYDST LRILDLVRER GVALRLQVVP GISSVQALAA RHQVPLNRIG EPLTVLPGRR LGGHGPIDNV VVMLDGQSAF ALLDDPALMI YWGAYLGTED EVLIAGPLQA VKAQILQVRE RERLRKGWIM DTYLLRRAL
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