| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2090 |
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| Symbol | |
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| ID | 5869879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2343495 |
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| End bp | 2344412 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547215 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001668327 |
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| Protein GI | 167033096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.394579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG CCATCAACGC CCTGCATAAC GCGCAAGGTG CCCCCACGGG TGCCGGCGCG
CCGGGCACCG CCCCCCGCCG CGCCAGCCTG AGCCAGCGCT GGAAAGGCAG CCGCAACCTG
CTGCCGGCCA TGCTGTTCCT TGGCCTGTTC TTCTTCGCCC CGCTGGTCGG CCTGTTGCTG
CGCGGGGTGC TTGAGCCAAC CCCTGGGCTG GGCAACTACG AGCAACTGTT CGCCAACTCG
GCCTACGCAC GGGTACTGTT CAACACCTTC TCGGTGGCTG GCGTGGTCAC CCTGATCAGC
GTACTGCTGG GCTTCCCGCT GGCCTGGGCG ATCACCCTGG TGCCCAAGGG CTGGGGCCGC
TGGCTGCTGA ACATCGTATT GCTGTCGATG TGGACCAGCC TGCTGGCACG CACCTACTCA
TGGCTGGTGC TGCTGCAGAG CTCGGGGGTG ATCAACAAGG CGCTGATGGC CATGGGCATC
ATCGATGCCC CGCTGGAAAT GGTGCACAAC CTCACCGGCG TGGTGATCGG CATGAGCTAC
ATCATGGTCC CGTTCATCGT GCTGCCGCTG CAGGCGACCA TGCACGCCAT CGACCCGATG
GTGCTGCAGG CGGGCTCCAT CTGCGGCGCC AGCCCGTGGA CCAACTTCTG GAAGGTATTC
CTGCCGCTGT GTCGCTCGGG GCTGTTCTCC GGCGCGCTGA TGGTGTTCGT GATGTCGCTC
GGTTACTACG TCACCCCGGC GCTGCTGGGC GGTGCACAGA ACATGATGCT GCCCGAATTC
ATCATCCAGC AGGTGCAGTC ATTCCTCAAC TGGGGCCTGG CCAGCGCCGC CGCCGCACTG
CTGGTGGCGA TCACCCTGGT GCTCTTCTAC CTGTACCTGA AGCTGCAGCC GGAATCCCCG
GTTGGCAACG CGAGGTAA
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| Protein sequence | MKVAINALHN AQGAPTGAGA PGTAPRRASL SQRWKGSRNL LPAMLFLGLF FFAPLVGLLL
RGVLEPTPGL GNYEQLFANS AYARVLFNTF SVAGVVTLIS VLLGFPLAWA ITLVPKGWGR
WLLNIVLLSM WTSLLARTYS WLVLLQSSGV INKALMAMGI IDAPLEMVHN LTGVVIGMSY
IMVPFIVLPL QATMHAIDPM VLQAGSICGA SPWTNFWKVF LPLCRSGLFS GALMVFVMSL
GYYVTPALLG GAQNMMLPEF IIQQVQSFLN WGLASAAAAL LVAITLVLFY LYLKLQPESP
VGNAR
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