| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1990 |
|---|
| Symbol | |
|---|
| ID | 5869780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2238876 |
|---|
| End bp | 2239190 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641547117 |
|---|
| Product | branched-chain amino acid transport |
|---|
| Protein accession | YP_001668229 |
|---|
| Protein GI | 167032998 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4392] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.638482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGGA TCCTGATTTT CGCCATGGGC GCCATCGTGT TCCTCAACCG CTATGCATTC
CTGGAGCCGC GCCTGCCCTT GCGCCTGAGC TCCAATGCCC GGCAGTTCCT CGGTTTTGCC
GTGCCGGGTA TGCTCACCGC CATTTGCGGC CCGATCATTT TCATGCCCGA GCACCAGCTC
AACCTGAGCC TGACCAACCC CTACCTGCTG GGCTCACTGG TGGCCATCGC CCTGGTGTTA
TTGACCCGCA GCGTATTGCT CAGCATGCTG GTGAGCATGT TGATCTTCTT CCTCCTGCGC
AGCTGGCTGG CATGA
|
|---|
| Protein sequence | MTWILIFAMG AIVFLNRYAF LEPRLPLRLS SNARQFLGFA VPGMLTAICG PIIFMPEHQL
NLSLTNPYLL GSLVAIALVL LTRSVLLSML VSMLIFFLLR SWLA
|
|---|
| |