Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1972 |
Symbol | |
ID | 5869762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2216534 |
End bp | 2217889 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547099 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001668211 |
Protein GI | 167032980 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0298113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT TCGCCCGGCT GCGCCAGGCT GTGCCGCAGC CAAGAATCAC CATTGCCCGC TGGATTGCCC TGACCACCTT GACGGCGATG TTGTTCCTGC TGCTACTCAA GATGCTGTTC AGCCTGCTGC TGAGCGTGTG GGCGCAACCG CCACTGCTGG AGAGTGGCGT GATCGAGAAA GTAGCAGCGG TGACTCGCAT CCTCGATGCC GCGCCCGCAG CGCAGCGCAG CAATATTGCC GGCGCGGCGG GCGACGGTTC TTACTCCGTG CGCTGGCTGC AACGCCATGA CGAAGCGGGC GTCCCGGTGT TGGTCGATGC CGAGTTCCGC GAGGGCACGC CTATTCTGCG CGCCTTGCTC AAGCGGCCGG ATGCCAGGGT TGAGGCATTC GAGCCTTCCG ACATGCCGGA ATACGCCCCT GAGCGTGGCT ATGCCCTGAT GGTCGAGTTG AGCGACAAGT CCTGGGTGCT GTTTCGCGCT ACTAGCCGAA GTTGGGGCCT GGATGAACTG CCGCGCAACC TGATCATCCT CGGCTTGATG CTGGCGTCCA GTTTTGCCGT CGCGTTCTTG GCAACGCGCT TTCTGGCCAA ACCCTTGGAG CGCTTTACCG AAGGGGCGCG CAGGTTTGGC AAGGACTTCA ACGCCCCACC CATCCCGGTG GTCGGCCCGC ACGACCTGCG CCAGGCCATT CTGGCGTTCA ATGCCACCCA GGCGCAGCTC AGGCATTACC TCAACGACCG TACCCAGATG CTGGCGGCCA TCTCTCACGA CCTGCGTGCA CCGCTGACGC GCATGCGTTT GCGTGCCGAG TTCATCGAGG ATGCCCAACT GCAGGCCAAG TTGTTCAAGG ACGTCGATGA AATGCAGGCA ATGGTCGACG CCGCATTGGT GTTCTTCCGT GATGATGCTC GGCTGGAGCC CACCACGGCA TTCGACCTAG GCGAACTGCT GTTGACCGTG GTGGATGATT TCAAGGATGC GGGCGTAGAA GTTGGCCTCA GCGGGCCACG CCGCTGCGTG TACACCGGCA GGCCGGTGGG TATCAAACGG GTGCTGGTCA ACCTGATCGA CAATGCCGCG AAGTACGGGT GCGAGCCAAC GGTGATGTTG ATGGTAACCG CCAGGCAGAT AGAAATAACC GTGCAGGATC GCGGACCGGG CATCGCGCCT GAACTGCATG AGCAGGTATT CGCGCCGTTT TACCGGATCG AAGGCTCACG CAACCGCGAC ACTGGCGGTG TGGGGCTGGG CCTGCCCGCC GCACGGGCCA TCGTGCTGGA GCAAGGCGGC AGCCTGACAT TGAGCAACCG CCCCGATGGC GGTCTGCAAG CCAAGGTCAC ACTGCCGCTG GGGTGA
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Protein sequence | MSLFARLRQA VPQPRITIAR WIALTTLTAM LFLLLLKMLF SLLLSVWAQP PLLESGVIEK VAAVTRILDA APAAQRSNIA GAAGDGSYSV RWLQRHDEAG VPVLVDAEFR EGTPILRALL KRPDARVEAF EPSDMPEYAP ERGYALMVEL SDKSWVLFRA TSRSWGLDEL PRNLIILGLM LASSFAVAFL ATRFLAKPLE RFTEGARRFG KDFNAPPIPV VGPHDLRQAI LAFNATQAQL RHYLNDRTQM LAAISHDLRA PLTRMRLRAE FIEDAQLQAK LFKDVDEMQA MVDAALVFFR DDARLEPTTA FDLGELLLTV VDDFKDAGVE VGLSGPRRCV YTGRPVGIKR VLVNLIDNAA KYGCEPTVML MVTARQIEIT VQDRGPGIAP ELHEQVFAPF YRIEGSRNRD TGGVGLGLPA ARAIVLEQGG SLTLSNRPDG GLQAKVTLPL G
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