| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1966 |
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| Symbol | |
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| ID | 5869756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2211489 |
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| End bp | 2212451 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547093 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001668205 |
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| Protein GI | 167032974 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.320638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0218625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACC GCAAACGCCT GCGCCACCTG GCCCTGGGCC TGCTGCTCGG TGGCCTGCTG
CCGTCGCTTG CCAGCGCCGA GCAGACCCTG CGCATCGGTT ACCAGAAATC CTCCACCCTG
CTGACCTTGC TCAAGGCACG CGGCACGCTG GAGCAGCGCC TGCAAGCCGA AGGCATTCGC
GTCAGCTGGC ATGAGTTCCC CAGTGGTTTG CCGTTGCTGG AGGCACTGAA CCTGGGCAAT
GTCGACCTGT CGGCGGACGT GGCCGATACA GTGCCGGTGT TCACCCAGGC AGCCGGCGCC
AAGCTCACCT ATTTTGCCCG TGAGGCACCG TCCCCTTCGG CCCAGGCCAT CCTGGTTCCG
GCCGACTCGC CGCTCAGGAC ACTGGCCGAT CTCAAGGGCA AGCGCGTGGC GGTGACCAAG
GCGGCGGGTA GCCACTACCT GTTGATCCAG GCCCTGGCCA AGGCCGGCTT GAGTTTCAAG
GACATCACCC CGGCGTACCT GATCCCTGCC GATGGCCGCG CGGCCTTCGA GAATGGCAAG
GTTGATGCCT GGGTCACCTG GGACCCTTAC GTGGCCAGTG CCCAGCGTCA GCAGAATGCA
CGCATTCTGG CCGATGGCAG CGAGCTGGCG AGTTACCAGC GTTACTATCT GGCCGGCAGC
GACTACGCCA CGGCGCACCC TGAAGTGCTT CAGCAGGTGT ATCAGGCGCT GCGCGAGATC
GGTACCTGGA CCAAGGCCAA CCCTGCAGCG GCGGCCCGGG TGCTGGGACC GTTGTGGGGC
AACCTGGACA GCGCCACGGT GCAGCAGGCC AATGGCCGGC GCAGCTATGA CGTGCAGCCG
GTGCAACTGG ACAACCTGGG TGAGCAGCAG CGTATTGCCG ATGCCTTCTA CCGTGAAGGG
CTGCTGCCCA AACCGGTGGA TGCGCGGGCG GTGACTGTGT TCGAGCCCCA GGCTGTTGAC
TGA
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| Protein sequence | MLHRKRLRHL ALGLLLGGLL PSLASAEQTL RIGYQKSSTL LTLLKARGTL EQRLQAEGIR
VSWHEFPSGL PLLEALNLGN VDLSADVADT VPVFTQAAGA KLTYFAREAP SPSAQAILVP
ADSPLRTLAD LKGKRVAVTK AAGSHYLLIQ ALAKAGLSFK DITPAYLIPA DGRAAFENGK
VDAWVTWDPY VASAQRQQNA RILADGSELA SYQRYYLAGS DYATAHPEVL QQVYQALREI
GTWTKANPAA AARVLGPLWG NLDSATVQQA NGRRSYDVQP VQLDNLGEQQ RIADAFYREG
LLPKPVDARA VTVFEPQAVD
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