| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1965 |
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| Symbol | |
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| ID | 5869755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2210512 |
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| End bp | 2211474 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547092 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001668204 |
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| Protein GI | 167032973 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0136316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTC GATCTCGCCT GCTGCTGTTC GCAGCCGCTA CGCTGCTGAC CACCCAGGCT
TTCGCCAGCG AACGCCTGAC CCTGCGCATC GGCGACCAGA AAGGAAACAT GCGTGCCCAG
CTGGAGGCGG CCGATGCCTT GCGCGACTTG CCTTACGATA TCCGTTGGGC CGAATTCCCC
GCAGCCGCCC CCCTGGCCGA GGCACTGAAC GCCGGGGCGA TCGATGCCGG CATCATCGGT
GACGCACCAT TGCTGTTCGT GCTGGCCTCC GGGGCGCCGG TCAAGGCCAT TGCCGTGGAC
AAGTCCGACC CCTACGGCAC AGCGCTGCTG GTGCGCCCCG ATGCAGCCTT GCAAAGCGCC
GCCGAGCTCA AGGGCAAGCG CATCGCCACC GGCCGCGGCT CTATTGGCCA TCACCTGGCG
CTGAAGGCAC TGGATCAGGT CGGCCTTAGC GAAAAAGACG TGGAGTTCCG CTTTCTCGGC
CCGGTCGACG CCAAGATCGC CCTGGCCAAC GGCTCGGTGG ATGCCTGGTC GACCTGGGAG
CCTTACACCG CTCTGGCCGA GCTGAGCGGC CAGGGCAGGG TGCTGGTCAA CGGCCGTGGG
CTGTCCAGTG GCAACAGTTT CCTGGCCGCT ACCGACAAGG CGCTGGACGA CCCGGCTCGG
CACGCTGCAC TGCAGGACTA CCTGGCCCGC CTGGCGGGTG CCCAGGTGTG GGCCTACCAA
CACCTGGACA GCTACTCGAA AACCCTGGCG GCGATCATTG GTTTCCCGGA GGGCGCCGCG
CGGCTGCAGT TTGAACGCCG TCAGTTGCAC TGGCAGGTCA TCGACGCCAA GACCATCAGT
GAACAACAGG AAACCGCCGA CTTCTACCAC GCCCACGGCC TTATGAATCA GCGCCTGGAC
GTTGGCCCGA CCTTCGCCAC TGGCTTTACC GTGCCCGCCA CTGACTCACT GGCCCAACAT
TGA
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| Protein sequence | MSIRSRLLLF AAATLLTTQA FASERLTLRI GDQKGNMRAQ LEAADALRDL PYDIRWAEFP
AAAPLAEALN AGAIDAGIIG DAPLLFVLAS GAPVKAIAVD KSDPYGTALL VRPDAALQSA
AELKGKRIAT GRGSIGHHLA LKALDQVGLS EKDVEFRFLG PVDAKIALAN GSVDAWSTWE
PYTALAELSG QGRVLVNGRG LSSGNSFLAA TDKALDDPAR HAALQDYLAR LAGAQVWAYQ
HLDSYSKTLA AIIGFPEGAA RLQFERRQLH WQVIDAKTIS EQQETADFYH AHGLMNQRLD
VGPTFATGFT VPATDSLAQH
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