Gene PputGB1_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1960 
Symbol 
ID5869750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2204331 
End bp2204834 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID641547087 
Productspore coat U domain-containing protein 
Protein accessionYP_001668199 
Protein GI167032968 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.139904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGTT GGCTGGCAAG TGGCCTGAGC GGAATCGGCA TGCTGTTGGC CGCCCCGCTG 
GGGGCGGTGA CCACCAGTAC ATTCACGGTG ACGGCGCAGA TTGTCGCCGG TTGCCTGGTG
GTGGGGGGTG TCACCAGCTA CGGCACGCTC GATTATGGCT CGCAGTCCGC GCTGTCCACG
GGCTTGCTCA GCACGTCGTT GGGTGGCTCA ACCGTGACCT TCCAGTGCAC GCCAGGCGTG
GCCATGAGCA TGAGCCTGGA TGGTGGGCAG AACAGTGCCA GCGGCACACG CAACCTGAAA
CGATCGAACG GCACGCAAGT GCTGGCCTAC CAGTTGTACC GGGACGCGGC CTACAGCCAG
AGCCTGGGAA TCGGCCAGAG CGTGGCCGTG AGCTATGCCG ACCCGACGGC GATCAAGCTG
CCGGTGTACG GGCGGGTTCA GCTGACCGGC ACGCTGCCGG CAGGGACCTA CACCGATGTG
GTGCAAGTGA CGGTGACCTG GTGA
 
Protein sequence
MRGWLASGLS GIGMLLAAPL GAVTTSTFTV TAQIVAGCLV VGGVTSYGTL DYGSQSALST 
GLLSTSLGGS TVTFQCTPGV AMSMSLDGGQ NSASGTRNLK RSNGTQVLAY QLYRDAAYSQ
SLGIGQSVAV SYADPTAIKL PVYGRVQLTG TLPAGTYTDV VQVTVTW