Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1960 |
Symbol | |
ID | 5869750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2204331 |
End bp | 2204834 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547087 |
Product | spore coat U domain-containing protein |
Protein accession | YP_001668199 |
Protein GI | 167032968 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.139904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGTT GGCTGGCAAG TGGCCTGAGC GGAATCGGCA TGCTGTTGGC CGCCCCGCTG GGGGCGGTGA CCACCAGTAC ATTCACGGTG ACGGCGCAGA TTGTCGCCGG TTGCCTGGTG GTGGGGGGTG TCACCAGCTA CGGCACGCTC GATTATGGCT CGCAGTCCGC GCTGTCCACG GGCTTGCTCA GCACGTCGTT GGGTGGCTCA ACCGTGACCT TCCAGTGCAC GCCAGGCGTG GCCATGAGCA TGAGCCTGGA TGGTGGGCAG AACAGTGCCA GCGGCACACG CAACCTGAAA CGATCGAACG GCACGCAAGT GCTGGCCTAC CAGTTGTACC GGGACGCGGC CTACAGCCAG AGCCTGGGAA TCGGCCAGAG CGTGGCCGTG AGCTATGCCG ACCCGACGGC GATCAAGCTG CCGGTGTACG GGCGGGTTCA GCTGACCGGC ACGCTGCCGG CAGGGACCTA CACCGATGTG GTGCAAGTGA CGGTGACCTG GTGA
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Protein sequence | MRGWLASGLS GIGMLLAAPL GAVTTSTFTV TAQIVAGCLV VGGVTSYGTL DYGSQSALST GLLSTSLGGS TVTFQCTPGV AMSMSLDGGQ NSASGTRNLK RSNGTQVLAY QLYRDAAYSQ SLGIGQSVAV SYADPTAIKL PVYGRVQLTG TLPAGTYTDV VQVTVTW
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