Gene PputGB1_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1905 
Symbol 
ID5869694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2145936 
End bp2146208 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content59% 
IMG OID641547031 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001668144 
Protein GI167032913 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.173408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000216257 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACAAGT CGGAACTGAT TGACGCTATC GCCGCATCTG CAGACATCCC GAAAGCTGTA 
GCCGGCCGTG CGCTGGATGC AGTCATCGAA TCCGTCACCG GCGCCCTGAA GCAAGGTGAC
GATGTAGTAC TGGTTGGCTT CGGTACCTTC TCGGTCAAGG ATCGCGCCGA GCGTACCGGC
CGCAACCCGC AAACCGGCAA GGCGATCAAG ATCGAAGCCG CCAAGGTTCC AGGTTTCAAG
GCAGGCAAAG GCCTGAAAGA CGCCGTCAAC TAA
 
Protein sequence
MNKSELIDAI AASADIPKAV AGRALDAVIE SVTGALKQGD DVVLVGFGTF SVKDRAERTG 
RNPQTGKAIK IEAAKVPGFK AGKGLKDAVN