Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1875 |
Symbol | |
ID | 5869660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2111711 |
End bp | 2112496 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546997 |
Product | hypothetical protein |
Protein accession | YP_001668114 |
Protein GI | 167032883 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTAG GTTCTTTCGG TTTCACCATT GCTGGCCTGG TCGTGGGTTT CATCGTCGGT ATGACCGGCG TCGGTGGCGG CTCGCTGATG ACCCCGATCC TGTTGTGGTT TGGCATCAAC CCGGCGACAG CAGTCGGCAC CGACCTACTC TATGCGGCCA TCACCAAGGC CAGTGGCGTC TGGGTGCATG CGCGCCAAAA GAACATCGAC TGGAAGATCA CCGGCCTGCT CAGCCTGGGC AGCGTGCCCG CTGCGGCGCT GACCTTGTGG TTCCTCAGCA CCCTGCACAC CGACACCTCG GCGCTAAATG CGATCATCAA GCAAGGCCTG GCGGTGGTGC TGATCCTCAC TGCGCTGGCC ATCCTGTTCA AATCGCGCCT GCAGGCCTTC GCCAGCCGCC ATGCCGGTGA CCACTACCAC CTCAGTGACC GCAGCCTCAA TATCCTCACT GTGCTGACCG GTGTGGTGCT GGGCGTGATG GTTACCCTCA CGTCCATCGG TGCTGGCGCA TTGGGCACCG TGGCGCTGTT CCTGCTTTAC CCGTTCCTGG TCACCCGCCG GCTGGTCGGC ACCGAAATTG CCCACGCCGT ACCGTTGACA CTGGTAGCAG GCCTGGGCCA CGCGGGCATG GGCAACATGG ACTGGTCGTT GCTGGGCTAC CTGCTGTTGG GCTCGCTGCC GGGTATCTAC CTGGGCAGCC ACCTCACCGG ACGCATCTCC GACCGCGTGC TGCGCCCGTG CCTGGCCGCC ATGCTGTTAC TGATCGGTTA CAAGCTCGCG TTCTGA
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Protein sequence | MDVGSFGFTI AGLVVGFIVG MTGVGGGSLM TPILLWFGIN PATAVGTDLL YAAITKASGV WVHARQKNID WKITGLLSLG SVPAAALTLW FLSTLHTDTS ALNAIIKQGL AVVLILTALA ILFKSRLQAF ASRHAGDHYH LSDRSLNILT VLTGVVLGVM VTLTSIGAGA LGTVALFLLY PFLVTRRLVG TEIAHAVPLT LVAGLGHAGM GNMDWSLLGY LLLGSLPGIY LGSHLTGRIS DRVLRPCLAA MLLLIGYKLA F
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