Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1842 |
Symbol | |
ID | 5869622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2072998 |
End bp | 2074125 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546959 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001668081 |
Protein GI | 167032850 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0292697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.208883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTAA CTGACGAGCA ACAACAGATA GCCGATGCGG TACGTACCTT CGCCCAGGAG CGCCTGAGAC CGCTCGCCGA ACAATGGGAC AAGGAACATC GGTTCCCGAA AGAGGCCATT GACGAAATGG CCGAGCTGGG CCTGTTCGGC ATGCTGGTGC CGGAGCAGTG GGGCGGCAGC GACACCGGTT ATGTGGCCTA TGCCATGGCC CTGGAAGAGA TCGCCGCCGG TGATGGGGCC TGCTCGACCA TCATGAGCGT GCACAACTCG GTCGGTTGCG TGCCGATCCT GCGTTTCGGC ACCGAGCAGC AGAAAGCACG GTTTCTCACC CCGCTGGCCA GCGGTGCGAT GCTCGGCGCC TTTGCCCTGA CCGAACCGCA GGCGGGCTCC GATGCCAGCA GCCTGAAGGC CCGTGCGCGT CTGGACGGTG ACCACTATGT GCTCACTGGC AGCAAGCAGT TCATCACCTC CGGGCAGAAC GCCGGGGTGG TGATCGTGTT TGCCGTGACC GACCCGGACG CCGGCAAGCG CGGGATCAGC GCCTTCATCG TGCCCACCGA TTCGCCGGGC TACCAGGTGG CGCGGGTGGA GGACAAGCTC GGCCAGCATG CATCCGACAC CTGCCAGATC GTCTTCGACA ACGTGCGTGT GCCGGTGGTC AACCGCCTGG GTGCAGAAGG CGAGGGCTAC AAGATAGCCT TGGCCAACCT TGAAGGTGGC CGCATCGGTA TCGCCTCGCA GGCGGTTGGC ATGGCCCGGG CCGCGTTCGA AGTGGCGCGC GACTACGCCA ACGAGCGGCA AAGCTTCGGC AAGGCGTTGA TCGAGCACCA GGCTGTGGCC TTCCGCCTGG CCGACATGGC GACGAAAATC GCCGTTGCCC GGCAGATGGT GCTGCACGCC GCCGCGCTGC GTGACGCCGG GCGCCCGGCG TTGGTGGAGG CGTCGATGGC CAAGCTTTTT GCCTCGGAAA TGGCCGAAAA GGTCTGCTCG GATGCCTTGC AGACCCTGGG CGGTTATGGC TATCTGAGCG ACTTCCCGCT GGAGCGGATC TACCGTGACG TTCGGGTTTG CCAGATCTAC GAAGGCACCA GCGACATTCA GCGCATGGTC ATTGCGCGCA ATCTTTGA
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Protein sequence | MLVTDEQQQI ADAVRTFAQE RLRPLAEQWD KEHRFPKEAI DEMAELGLFG MLVPEQWGGS DTGYVAYAMA LEEIAAGDGA CSTIMSVHNS VGCVPILRFG TEQQKARFLT PLASGAMLGA FALTEPQAGS DASSLKARAR LDGDHYVLTG SKQFITSGQN AGVVIVFAVT DPDAGKRGIS AFIVPTDSPG YQVARVEDKL GQHASDTCQI VFDNVRVPVV NRLGAEGEGY KIALANLEGG RIGIASQAVG MARAAFEVAR DYANERQSFG KALIEHQAVA FRLADMATKI AVARQMVLHA AALRDAGRPA LVEASMAKLF ASEMAEKVCS DALQTLGGYG YLSDFPLERI YRDVRVCQIY EGTSDIQRMV IARNL
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