Gene PputGB1_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1784 
Symbol 
ID5869564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2001926 
End bp2002480 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content63% 
IMG OID641546901 
ProductXRE family transcriptional regulator 
Protein accessionYP_001668023 
Protein GI167032792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGC ACGAAGAGGT TGAAGCCCTC GCGATCCTTA TTCACGACCT GCGCAAATTC 
AAGAACCTGA CCTTGGGTGA ACTGGCCGAG CGCATCAACC GCTCTGTCGG TTTTCTCTCC
CAGGTCGAAC GCGGTGTTTC ACGCCCGACC GTGGCGGACC TCACCGCTAT CAGCGAAGCG
CTCGGCGTAT CCACCGCGTA CTTCTACAAC CTGAGCAAGC CCCGCAGCAT CGGCTGGGTC
ACGCGCCCCC ATGAGCGGCG CACGCTGTAC CTGGAGTCGG GCATTACCGA CGTGCTGGCC
TCGCCGACCA TCGCCGGCGC GTTCGCCATG CTCGACAGCC ATCTCGAGCC CGGCGCCACC
AGTGGCGAGG ACTACCTGAG CGATCGTTCC GAGCAGGGCT GCTTCGTGCT CGAAGGCGAG
CTCACGGTAT GGCTGGACCA GGGTGACGCC GTGACCCTGC ACGCCAACGA CTGCTTCCAG
CTGCAACCCC ACGCGCAATT CCGTTACGCC AACCTGACGG AAAAGACCAC CCGTGTGCTC
TGGGTCTTCA ATTGA
 
Protein sequence
MKMHEEVEAL AILIHDLRKF KNLTLGELAE RINRSVGFLS QVERGVSRPT VADLTAISEA 
LGVSTAYFYN LSKPRSIGWV TRPHERRTLY LESGITDVLA SPTIAGAFAM LDSHLEPGAT
SGEDYLSDRS EQGCFVLEGE LTVWLDQGDA VTLHANDCFQ LQPHAQFRYA NLTEKTTRVL
WVFN