Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1758 |
Symbol | |
ID | 5869538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1969964 |
End bp | 1972390 |
Gene Length | 2427 bp |
Protein Length | 808 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546875 |
Product | hypothetical protein |
Protein accession | YP_001667997 |
Protein GI | 167032766 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000906053 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGCAC GCATTCCGCA ATACCAGCGC CGCGTGGCGC CAGAAGTGGT TTCCGCTCCG CGCGTTGCCG AGGCATCCGT CGATGCGTCA GGTCTGGCGC GTGGCCTATC CAGCCTTGCC GGTGATTTGA ACGCCGTGCA CCAGCGCGAG GTGCAGGACG CCAACCAGAC CGCCTTGCTC AATGCTGACA ACCAGATGGG AACTTGGCAG AACAATGCCT TGTTCAATCC GGAGAACGGC GCTTTTACCA GAAAAGGTGC GGCGGCACTG AACATTAGCC AGACCGTCCT GGGCGACTTC GACAAGCAGC AGCAGGCCAT TTACGACGGT CTGACCAACG ATCAACAGCG CCAGATGTTC AGGCAGTCCT CGCTGCAGCG GCGCTCCGGC CTTGAGGCGA AGCTTGGCAG CTACGAGTTC GGGGAGCAGC AGCAGTACAA GGATGACGTC GACAAGTCGT CGATTCAGTT GGCCATGGAT AGCGCGGCCT TGAACTACAA CGACCCCGAG GCCGTGGCCC AGAACCGGGC AAAGATGGAT GCAGTCCTGC AACTGCGCGG CTCCCGTAAC GGCTGGTCGC CGGAGGAAAT GCAGGCCCAG CGCCAACGGA TGAACAGCAG CCTTTCCCAA GCTGTCATTC AGCGCACGCT GGTGGACTCC CCGCAGAAGG CTCGCGGACT GTACGAGCAG TTCAAGGATG GTATGACTGC CGAAGACCAA ATCCGCGCCA CCAACGGTAT CGACCAAGGG TTCCGCCGCC TTGAGGCCGA AGCCCGGCAG CGTCAGGTCG AGGCCCGGCA GTTGCAGGCC ATCGCCCGTG TTGAGCTGCA ATCCCGCGTT CAGGATGCCC AGGCGGCGTA CCTGCAGGGC TTTGAGTTCG ACAACCCGCC ATCCCGCGCG GACTTCAATG CAGCCTATGG CGAGAAGGGT GGCAAGGCAT ATGAGGCTTT CGCCAAGGTC CAGGCGGTGG CGCCCGCTAT TCGCGAGTTT GCGACAGCCA CGCCGGATGA GCGCCAGAGG ATCCTGGCGG GATTCAATCC CGCACTGTCG CAGCAGGACG GCGCCTTCTA TGGCAGGCAG TCAGCCGGGA TGCTGGAGCA GGGGAACATC GACCTGAACA GCAGGCCGAA GGTGAAGAAT ACTGATGGCT CGATCAGCAC CGTCCGATCA ATGTCCGCAA ACTTCGACGG CCAAGAGGTG CTGTTGCCCA CGGTCAGCGA TGACGGCCGC ATCATGAGCG AGCAAGAAGC GATCGACACG TACCTGAAAA CGGGCCGCAA CTTGGGTAAG TTCGATACCC CAGAGCACGC CACTGCCTAC GCTGAGTCGC TACACAACGA CCAAGCCAAG CAGTACGTAG ATGGTTCGCC CTCCGTTGGC GAAGGCTTCA AGGAAGATGC GCAACTCTAT AAGCACCTGG TCACGGTAGG CGCTGGCCTA TTGAAACAAC AGCAGAAGGA CCCGGCGGCC TACGTTGCCC AGTACAGTCC CGCCGTGCGC AATGCTTACG CCACAGCACA GCAGGCAGGT ACCCAGGAGG CATATAAGGC CTATGCGGAT GCCACCATTG CCGAGCAGCG CCGGCTGGGC GTTCAGTCGC CGAAGCTGCT TTCGGACGCC GCGGCCGACC AGATCGCCGC AGGATTCAAC AGCCAGGTGG CCGGTGGCGA GAACGCCGCC ACGCTGATCG AGCAGCAGCA GGAGCAGTGG GGCAGCAACT TCCCGCTCAT CGCCCAGCAG CTGGGAAAGA AGCTTCCCCC CGAGGCGCAG GTGATCGCTA CCGGCCTGCC GAAGGATGTT GCGGAGCGCA TGGCCTCGGT CGCCAACGTC ACCGAAGCGG ACCTGAAAAA GGGCTTGGAC AAAGGCATTG CAACGAATGT TGCGACCGCA GTGCAGAGCG CCATGAACCC ATTTGCTCAA TCCCTCCAGG GCCAGGCCGG CGGCATCAAC ACCTTCAACA CGATGTACGA GGCGGCCAAT AAGGCTGCCC TGTCGTATGT GCGCCAAGGC ATGACGCCAG AGAAGGCGGC AGAGCGCGTG GTGAATGGCA TGGTGAACGA CAAGTACGAC TTCTTCGACA CCTACCGTGT ACCCAAGACC CTGGACACTG CAGCCGTGAA GCGCGGCGCC GACCAGGCAC TGGAGAGCAT TGCCGCTGGC GACCTGATGC CGCTGCCTGG TATTCGTGGT GTGACTGACA GCGCGAACAT CGAGCAACTG CGCCAGGCGG TGGTAGATGG CGGTCAGTGG GTGCCGAACA ACGACGAGAG CGGATTGAGC CTGACCCTCA ACGGCTACCG CCTGTTGGGC AAGGACGGTA AGCCAATCAC CCGCACCTGG GATGAATTGA CGGCTGACGG CCTGAAACGC CAGGAAAGCG ATGCATCTCG CATCGGTCGA GTACGCGGCC TGGGGATCAA CAATTGA
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Protein sequence | MAARIPQYQR RVAPEVVSAP RVAEASVDAS GLARGLSSLA GDLNAVHQRE VQDANQTALL NADNQMGTWQ NNALFNPENG AFTRKGAAAL NISQTVLGDF DKQQQAIYDG LTNDQQRQMF RQSSLQRRSG LEAKLGSYEF GEQQQYKDDV DKSSIQLAMD SAALNYNDPE AVAQNRAKMD AVLQLRGSRN GWSPEEMQAQ RQRMNSSLSQ AVIQRTLVDS PQKARGLYEQ FKDGMTAEDQ IRATNGIDQG FRRLEAEARQ RQVEARQLQA IARVELQSRV QDAQAAYLQG FEFDNPPSRA DFNAAYGEKG GKAYEAFAKV QAVAPAIREF ATATPDERQR ILAGFNPALS QQDGAFYGRQ SAGMLEQGNI DLNSRPKVKN TDGSISTVRS MSANFDGQEV LLPTVSDDGR IMSEQEAIDT YLKTGRNLGK FDTPEHATAY AESLHNDQAK QYVDGSPSVG EGFKEDAQLY KHLVTVGAGL LKQQQKDPAA YVAQYSPAVR NAYATAQQAG TQEAYKAYAD ATIAEQRRLG VQSPKLLSDA AADQIAAGFN SQVAGGENAA TLIEQQQEQW GSNFPLIAQQ LGKKLPPEAQ VIATGLPKDV AERMASVANV TEADLKKGLD KGIATNVATA VQSAMNPFAQ SLQGQAGGIN TFNTMYEAAN KAALSYVRQG MTPEKAAERV VNGMVNDKYD FFDTYRVPKT LDTAAVKRGA DQALESIAAG DLMPLPGIRG VTDSANIEQL RQAVVDGGQW VPNNDESGLS LTLNGYRLLG KDGKPITRTW DELTADGLKR QESDASRIGR VRGLGINN
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