Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1741 |
Symbol | |
ID | 5869521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1956693 |
End bp | 1957604 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641546858 |
Product | hypothetical protein |
Protein accession | YP_001667980 |
Protein GI | 167032749 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000000197568 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATCGAGA AGATTGGACA CATCAAAAAT CCGCTTACAG TGATCGCGAT GTTCGCGGGC ATTGCCGAGG TCAGCGGTGC AGTTGTACTT CCGTTCTTGA ACGAAGATGT TCAGGGGACG TATGTATGGT TTCTCATGGG CTTTCCTTGC CTGTTGGTCC TCCTGTTCTT TGCAACTTTG TGGCATGACT ACACAGTTTT GTATGCGCCC TCCGATTATC CGAACGCGGA TAGCTTCCAA AATCTTTTTG AAAAGCGCCA AGACCGCGGG GTTTACATTT CTGAGTTCAG GGACCTGAGC GCTGATCTTG TAGCTGCCCC AGAGGTCACT GCTGCCCAGG CTGAACCGGA GCACCAAGCT CAGGAGCCTG CCGCGCCTGT TGCCCCCGAA CCTGAACCTG AAGCGGATGC GGTGGAAGTA AGGCCTGAGC CGCCAGAGCC AGTCGCAGCC ATGCATGCTC AGCTAATTGA GAACTTCATC AAGTTCGGTG ACTACAAGAA AGAGGTCGCC AGGCAGCTGC AGGATCAGTT CCGCGCGCCA TACCGACTTT CTGAGTCACC TAGGACAATG CCAGACTCTG TATTCGATGT GGTGCTTAGC GGAATTGATA CGAATTGGGT TGGCAGAATT CTCTTTGTCA CCAACAGGAA TTTAAAAACG CAAATTGAAG CGGCAAAGCA GTGGATTCAT ACCGTCTCCA TGTTTCGCGA TAGCCTTGAA CCAAGGGAGG CCCTGAAACT CCGGTGCTTG GTGTGTATTG TTTACAAGGG CAACAGCATG AGCCAGGAGC AACTTTACGA ATTCGAATCC TCCATCCAGG ACACGGCGCT GATGTTCCCA TTCAGCGTGC ATACCCAGCG GTACGTGCTT GAAGACCTGG TCGACAGAAA GTATCCGGGT TTCCTGTCTT GA
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Protein sequence | MIEKIGHIKN PLTVIAMFAG IAEVSGAVVL PFLNEDVQGT YVWFLMGFPC LLVLLFFATL WHDYTVLYAP SDYPNADSFQ NLFEKRQDRG VYISEFRDLS ADLVAAPEVT AAQAEPEHQA QEPAAPVAPE PEPEADAVEV RPEPPEPVAA MHAQLIENFI KFGDYKKEVA RQLQDQFRAP YRLSESPRTM PDSVFDVVLS GIDTNWVGRI LFVTNRNLKT QIEAAKQWIH TVSMFRDSLE PREALKLRCL VCIVYKGNSM SQEQLYEFES SIQDTALMFP FSVHTQRYVL EDLVDRKYPG FLS
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