| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1732 |
|---|
| Symbol | |
|---|
| ID | 5869512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1952034 |
|---|
| End bp | 1952381 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641546849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001667971 |
|---|
| Protein GI | 167032740 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000066892 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCGA AAATCCGATG GGCGATTTTG ACCGTTATGA CGATGGCCTC GGCGCAACCC
GCTTTTGCTT ACACGGGTAA CGACTTGGTC GATTGGTCGA GAGGATTCGA CGCAATGCAG
TCCGGGGGTG TGGCCACTTG GAAAGACGGG ATGTTCGTTG GATACGTGGC TGGCGTCGCA
GAAACGGTAA ATGGCGTTAT CTACTGCCCG AAACGTGAAC CGACTCACCT GCAGAATGCA
GCGATAGTCG CAAAGCAGCT CAAAGCAAAT CCAGAAGTTT GGGCAGAGGA CGCAAGCGTA
ATCGTCGTAA CCGCCCTTCG ATCAGTTGCA CCATGCCCTA AGCCCTAA
|
|---|
| Protein sequence | MLPKIRWAIL TVMTMASAQP AFAYTGNDLV DWSRGFDAMQ SGGVATWKDG MFVGYVAGVA
ETVNGVIYCP KREPTHLQNA AIVAKQLKAN PEVWAEDASV IVVTALRSVA PCPKP
|
|---|
| |