Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1711 |
Symbol | |
ID | 5869491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1937095 |
End bp | 1938237 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546828 |
Product | integrase family protein |
Protein accession | YP_001667950 |
Protein GI | 167032719 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.213299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000987295 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGAACCA TCACGCAGCG CAAGCGCAAG GACGGGTCAT CGGGCTTCAC CGCCCAGATC CGCATCATGA AGGAAGGGAA GGCAGTTTAT CAGGAAAGCC AGACGTTCGA CCGGAAGGCG ACGGCGCAGG CCTGGATCAG GAAACGTGAG GCGGAGCTGT ACGAGCCTGG GGCCATCGAG AAGGCGAACC GCAATGGCGT GACGGTGAAG CAGATGATCG ACCGGTACCT GGTCGAATAC GAGAAACTGC GGCCGCTGGG CAAGACCAAG CGCGCAACCC TCAAGGCCAT AGGTGAAAGC TGGCTTGGCG AGGTGGAAGA CCAGCAGCTG ACCAGCCAGA AGCTGGTTGA CTACGCCATG GACCGGATCG AGAAGGACGG CATTCAGCCG CAAACCGTCG GCAACGACCT GGCGCACCTT GGCGCTGTAC TGTCCGTTGC CCGGCCGGCG TGGGGGTATG AGGTCGATCC GCTGGCAATG CCCGATGCCC GGCGCGTATT AAAGAAGCTG GGGGCTGTGA CCAAGAGCGT GGAGCGCAAC CGCCGCCCGA CTCTCGCCGA ACTAGAGCGC ATCATCAAGT ACTTCCAGAA GGTTCGCGAT GCCCGCCGGC AAGAGATCGA CATGGTGCGC GTGGTGGTAT TCGCGCTGTT CTCGACTCGG CGCCAGGAAG AGATCACGCG CATTCGCTGG GATGCGCTCA ACGACCAAGA GCAGTCGGCA CTGATCACCG ACATGAAGAA CCCTGGCCAG AAGTACGGCA ATGATGTGTG GTGCCATATG CCCGACGAGG CCTGGCGCAT CCTGCAGTCC ATGCCAAAGG TTGCCGATGA GGTGTTCCCG TACAACTCAA GGTCGATATC GGCGTCGTTC ACCAGGGCCT GTCACTTCCT GCAGATCGAA GACCTGCACT TCCACGACCT GCGCCACGAT GGCGTAAGCC GCTTGTTCGA AAAGGGGTGG GATATTCCGC GCGTGGCCAG CGTGTCGGGC CACCGGGATT GGAACTCGAT GCGGCGCTAT ACGCACCTGC GGGGGAAGGG AGACCCTTAT GAAGGGTGGG AGATGCTTGA AGAGGTGATA ACGGGCCCCG TTATCGAGGC CCAAAAGAGG CTCAAGAGGC GCGTCGAAGA CCGCGACCCA TGA
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Protein sequence | MGTITQRKRK DGSSGFTAQI RIMKEGKAVY QESQTFDRKA TAQAWIRKRE AELYEPGAIE KANRNGVTVK QMIDRYLVEY EKLRPLGKTK RATLKAIGES WLGEVEDQQL TSQKLVDYAM DRIEKDGIQP QTVGNDLAHL GAVLSVARPA WGYEVDPLAM PDARRVLKKL GAVTKSVERN RRPTLAELER IIKYFQKVRD ARRQEIDMVR VVVFALFSTR RQEEITRIRW DALNDQEQSA LITDMKNPGQ KYGNDVWCHM PDEAWRILQS MPKVADEVFP YNSRSISASF TRACHFLQIE DLHFHDLRHD GVSRLFEKGW DIPRVASVSG HRDWNSMRRY THLRGKGDPY EGWEMLEEVI TGPVIEAQKR LKRRVEDRDP
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