Gene PputGB1_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1711 
Symbol 
ID5869491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1937095 
End bp1938237 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content61% 
IMG OID641546828 
Productintegrase family protein 
Protein accessionYP_001667950 
Protein GI167032719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.213299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000987295 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAACCA TCACGCAGCG CAAGCGCAAG GACGGGTCAT CGGGCTTCAC CGCCCAGATC 
CGCATCATGA AGGAAGGGAA GGCAGTTTAT CAGGAAAGCC AGACGTTCGA CCGGAAGGCG
ACGGCGCAGG CCTGGATCAG GAAACGTGAG GCGGAGCTGT ACGAGCCTGG GGCCATCGAG
AAGGCGAACC GCAATGGCGT GACGGTGAAG CAGATGATCG ACCGGTACCT GGTCGAATAC
GAGAAACTGC GGCCGCTGGG CAAGACCAAG CGCGCAACCC TCAAGGCCAT AGGTGAAAGC
TGGCTTGGCG AGGTGGAAGA CCAGCAGCTG ACCAGCCAGA AGCTGGTTGA CTACGCCATG
GACCGGATCG AGAAGGACGG CATTCAGCCG CAAACCGTCG GCAACGACCT GGCGCACCTT
GGCGCTGTAC TGTCCGTTGC CCGGCCGGCG TGGGGGTATG AGGTCGATCC GCTGGCAATG
CCCGATGCCC GGCGCGTATT AAAGAAGCTG GGGGCTGTGA CCAAGAGCGT GGAGCGCAAC
CGCCGCCCGA CTCTCGCCGA ACTAGAGCGC ATCATCAAGT ACTTCCAGAA GGTTCGCGAT
GCCCGCCGGC AAGAGATCGA CATGGTGCGC GTGGTGGTAT TCGCGCTGTT CTCGACTCGG
CGCCAGGAAG AGATCACGCG CATTCGCTGG GATGCGCTCA ACGACCAAGA GCAGTCGGCA
CTGATCACCG ACATGAAGAA CCCTGGCCAG AAGTACGGCA ATGATGTGTG GTGCCATATG
CCCGACGAGG CCTGGCGCAT CCTGCAGTCC ATGCCAAAGG TTGCCGATGA GGTGTTCCCG
TACAACTCAA GGTCGATATC GGCGTCGTTC ACCAGGGCCT GTCACTTCCT GCAGATCGAA
GACCTGCACT TCCACGACCT GCGCCACGAT GGCGTAAGCC GCTTGTTCGA AAAGGGGTGG
GATATTCCGC GCGTGGCCAG CGTGTCGGGC CACCGGGATT GGAACTCGAT GCGGCGCTAT
ACGCACCTGC GGGGGAAGGG AGACCCTTAT GAAGGGTGGG AGATGCTTGA AGAGGTGATA
ACGGGCCCCG TTATCGAGGC CCAAAAGAGG CTCAAGAGGC GCGTCGAAGA CCGCGACCCA
TGA
 
Protein sequence
MGTITQRKRK DGSSGFTAQI RIMKEGKAVY QESQTFDRKA TAQAWIRKRE AELYEPGAIE 
KANRNGVTVK QMIDRYLVEY EKLRPLGKTK RATLKAIGES WLGEVEDQQL TSQKLVDYAM
DRIEKDGIQP QTVGNDLAHL GAVLSVARPA WGYEVDPLAM PDARRVLKKL GAVTKSVERN
RRPTLAELER IIKYFQKVRD ARRQEIDMVR VVVFALFSTR RQEEITRIRW DALNDQEQSA
LITDMKNPGQ KYGNDVWCHM PDEAWRILQS MPKVADEVFP YNSRSISASF TRACHFLQIE
DLHFHDLRHD GVSRLFEKGW DIPRVASVSG HRDWNSMRRY THLRGKGDPY EGWEMLEEVI
TGPVIEAQKR LKRRVEDRDP