Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1700 |
Symbol | |
ID | 5869480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1927278 |
End bp | 1927805 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546817 |
Product | blue (type1) copper domain-containing protein |
Protein accession | YP_001667939 |
Protein GI | 167032708 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4454] Uncharacterized copper-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00435665 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCGCC TGTTCATTGC CGCCACCCTT GCCCTGGCCA GCCTGCCGAC CTTTGCCGGC GAGGCGCAAA CCTTCGCCTT TGGTGAGCCG GCTGCAGCGG CCAAGGCCAC CCGCACGGTC AACGTGGTGC TCAAGGACAT TGCTTTCGAG CCTAAGAGCC TGCAGGTAAA AGCCGGCGAG ACCGTGCGTT TCGTGCTGGT CAACGAGGGC AAGCTGCCAC ACGAGTTCAA CCTGGGCGAC AAGGCCATGC ATGCCGAACA CCAGAAGAAA ATGGTCGCCA TGCAAGGCAA GATGTTCACC GAGGCCATGA ACCACGAAGG CATGGACCAC GGTCAGATGG CGAACCACGG GCAAATGATG GGTCACGGCG GTGGCCATGG CCACGGTGGT GGCAACACCG TGCTGGTAAT GCCCGGCCAG CGTGCCGAGC TGACCTGGAC CTTCCGTAAG TCGGCACCCA TCGAGTTTGC CTGCAACGTG CCGGGGCATT ACCAGGCCGG CATGGTCGGG GCATTGACCA TCGAGTGA
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Protein sequence | MKRLFIAATL ALASLPTFAG EAQTFAFGEP AAAAKATRTV NVVLKDIAFE PKSLQVKAGE TVRFVLVNEG KLPHEFNLGD KAMHAEHQKK MVAMQGKMFT EAMNHEGMDH GQMANHGQMM GHGGGHGHGG GNTVLVMPGQ RAELTWTFRK SAPIEFACNV PGHYQAGMVG ALTIE
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