| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1699 |
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| Symbol | |
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| ID | 5869479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1926415 |
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| End bp | 1927095 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546816 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001667938 |
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| Protein GI | 167032707 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00419772 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTGC TGATCGTCGA AGACCAGGCC CGCACCGGCC AGTACCTGAG CCAGGGCCTG
AGCGAGGCCG GCTTTGCCAC CGAGTTGGCC ACCGATGGCG AGACCGGGCA GTTCCTCGCC
CTGACCGGCG ACCACGACCT GCTGATCCTC GACGTGATGC TGCCCGGGCG CGACGGCTGG
CAAATCCTTC AGGCCGTGCG CCAGGCTGGC CTGGATACAC CCGTGCTGTT CCTGACCGCC
CGCGACGCCG TCGAGGACCG CGTGCATGGC TTGGAGCTGG GCGCCGATGA TTACCTGGTC
AAGCCGTTCG CCTTTTCCGA ACTGCTGGCC CGGGTACGCA GCCTGCTGCG CCGGGGCGCC
AGCCCAAGCC AGGACACCAC CCTGAGCCTG GCCGACCTGC GCCTGGACCT GATCCGCCGC
CGCGCCGAAC GCGCAGGCAC CCGTATCGAC CTGACCGCCA AGGAGTTCTG CCTGCTCGAA
CTGCTACTGC GCCGCCAGGG TGAGGTGTTG CCAAAATCGC TGATCGCCTC GCAGGTGTGG
GACATGAACT TCGACAGCGA TACCAATGTG ATCGAAGTGG CAATCCGCCG CCTGCGCCTG
AAAATCGACG ACCCGCACCC CAACAAGCTG ATCCACACGG TGCGCGGCAT GGGCTACGTA
CTCGAAGAAC GCACTGAATG A
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| Protein sequence | MKLLIVEDQA RTGQYLSQGL SEAGFATELA TDGETGQFLA LTGDHDLLIL DVMLPGRDGW
QILQAVRQAG LDTPVLFLTA RDAVEDRVHG LELGADDYLV KPFAFSELLA RVRSLLRRGA
SPSQDTTLSL ADLRLDLIRR RAERAGTRID LTAKEFCLLE LLLRRQGEVL PKSLIASQVW
DMNFDSDTNV IEVAIRRLRL KIDDPHPNKL IHTVRGMGYV LEERTE
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