Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1697 |
Symbol | |
ID | 5869477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1923784 |
End bp | 1925025 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546814 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_001667936 |
Protein GI | 167032705 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00934342 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCAGAC CCTTGCCCAT TTTTATCGGC GCGCGCTACA CCCGAGCCAA GCGTCGCAAC CACTTCATCT CGTTCATCTC GATGACGTCG ATGATCGGCC TGTCGCTGGG CGTGCTGGCG ATGATTGTGG TGCTGTCGGT GATGAACGGC TTTCAGCGCG AAATGAGCTC GCGCATTCTC GGGTTGGTGC CGCATGCCGC CATCCTTGGC GTGCAGCCAT TGGACGATTG GCACAAGGTG GCCGACGCTG CCATGCAGAA CCCGGCGGTG ATGGCGGTGG CGCCGATTAC CGAGATGGAA GGCATGCTGT CGTACAAAGG TGCGATGCAG CCGATTCAGG TGGGTGGTAT CGACCCGGCC GAGGAGGGCA AGGTCTCGAT CGTTGGCCAG CACATCGTGC AGGGCCGCTT GCAAGACCTG CAGCCAGGTG AGTTCGGTGT GGTCATCGGC GAGCTGACGG CGCGGCGTTT TCGTCTGAAC ACTGGCGACA AACTGACCTT GATCGTGCCG GAAATCAGCA AGGAGCCGGG TGGCATTACC CCGCGCATGC AGCGCCTGAA CGTGGTCGGG ATCTTCAAGG TGGGCGCCGA GCTGGATGGC TCGCAAGCCT ATATCCATGT GGCTGATGCT GCCGAGATGC AACGCTGGGC GCCGGGCCAG GTGCAGGGCG TGCGCCTGAA GCTGCATGAC CTGTATGCCG CGCCGCAGGT GTCCAAGGCA ATTGCTGCAG GGCTCGGCGA CGCCTACCGC GCCGATGACT GGTCGCACAC CCAGGGCAGC CTGTTCAGCG CCATGAAAAT GGAGAAGACC ATGATCGGCC TGCTGCTGAT GATGATCATC GCGGTGGCGG CGTTCAATAT CATCGCCACC CTGGTGATGG TGGTGAACGA CAAGGGGCCG GACATTGCCA TCCTGCGTAC CTTGGGCGCC ACGCCAGCGC AGATCATGGG CACGTTCATG GTTCAGGGCA GCCTGATTGG TGTTGTCGGG ACGCTGATCG GCGGCGTGCT GGGCGTGATT GCGGCGTTCA ATGTCAGTCA AATCGTTGGT TGGCTGGAGC GGGTGAGCGG GCAGCACATC TTTACCTCGG ATGTGTACTT CGTCAGCAGC TTGCCGTCGC AATTGCAATG GGGTGATGTG GCCATGATTT GCACGGCTGG CCTGGTGATG AGCTTCCTGG CGACCATTTA CCCGGCTTAC CGGGCGTCGC AGGTGCAGCC GGCGATCGGT CTGGCGGTTT GA
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Protein sequence | MFRPLPIFIG ARYTRAKRRN HFISFISMTS MIGLSLGVLA MIVVLSVMNG FQREMSSRIL GLVPHAAILG VQPLDDWHKV ADAAMQNPAV MAVAPITEME GMLSYKGAMQ PIQVGGIDPA EEGKVSIVGQ HIVQGRLQDL QPGEFGVVIG ELTARRFRLN TGDKLTLIVP EISKEPGGIT PRMQRLNVVG IFKVGAELDG SQAYIHVADA AEMQRWAPGQ VQGVRLKLHD LYAAPQVSKA IAAGLGDAYR ADDWSHTQGS LFSAMKMEKT MIGLLLMMII AVAAFNIIAT LVMVVNDKGP DIAILRTLGA TPAQIMGTFM VQGSLIGVVG TLIGGVLGVI AAFNVSQIVG WLERVSGQHI FTSDVYFVSS LPSQLQWGDV AMICTAGLVM SFLATIYPAY RASQVQPAIG LAV
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