| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1687 |
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| Symbol | |
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| ID | 5869467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1908570 |
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| End bp | 1911887 |
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| Gene Length | 3318 bp |
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| Protein Length | 1105 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546804 |
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| Product | non-specific serine/threonine protein kinase |
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| Protein accession | YP_001667926 |
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| Protein GI | 167032695 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.306833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.099326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATG GCGATGCGCA GCAACTGCTG AGGGCCTATC CGGGGTGGGT CGACTTCATC
GAAGCCGGCA CGATGGCACG AGGCCGCAGC TATGCTGCGC AAGAGCGAGC ACGCATCCTG
TCGCTGCACG GCGCAACGAT CGAAGCCATC TGCAAGGGCT CCACAGGCGA GACCTACCAG
CAGAACATCC GGCTGGTCGT TAACTACGGG GACCTGCGGG TATTTGGGCG CTGCAGCTGC
CCAGTTGGGC TCAACTGCAA ACACTGCGTC GCGGCGCTGC TGCAATTGCA GGACGGCCTC
GACGCCGCAG GCCCCCATGA ACAATCCGCC CTGTCGCTGC CACCGGACCT CAACCTGTGG
GTGCAAACCC TTGAGTCCCC CTCCCAACCT GCATCGCCTC AAGGGCCAGC ACGCAAAGGC
CCGGCAATCT ATTACCGCAT TCACGTGGAT CACGGCGTCT GGCGACTCGA GCCGATCAAG
GGCACCCGAC AGGCAGACGA CACCTTGAAG ATCGGTCGCA TCACATCGAT GCCCGAAATG
CTCTACTACA CACCTCGCTA CGTCACAGAA GACGATGCGC GGCTTTTGCG CCTGATTGAT
TCGCGCAGCG AAACCACTAC GCCCATGGCG CAACTGGAAG GCAAGCAGGG CGGGGAGCTC
TACAGCTATG CCCTGGCCAC CGGTCGCCTG CTATTTGAGG ACGACTTGGC GCCACTGTCC
CCTGGGCCGG AGCTGCATGC CGAGTTTCGC TGGGTCAGGC TGGACAATGG CAGCTACCGT
GGCGCCTGGT ACCACGATGA TCACCAGCAG TTGCGGGCAG TGCCCATCGA GCCCATGCAC
TATGTCGACC GACAGCGGCA TTTGACCGGC AAGCTGCGCC ACGACCTCGA CCCCTTCATT
GCCAGCCAGC TTGCGCGCGC GCCCATCGTG CCGGAGCATC TGGTCATCCC CTTGAGTCAC
CGATTGAACG CCTTGAACCG TCACGTCCCC ACGCCCACTG CCGTGAGCAC CGAACATATC
GAAGACATCA CGCCAAAAGG GCGACTGACG CTGGGCAGCC TCGAATTCAG CGCCTACATG
CCCAAGACCG GCCGTATGCA GCGACAACTG CAACACCGTG CCGCGCTGGC ATTCGACTAC
GACGACCTGC GTACCAGCGG TAACGACGAA AAGCCGCTGA CCCGCCTGGT CGGCAACACC
AGCCAGCGCA TCCGCCGCCA GCCGCAAGCC GAACAGGCCC TGCGCAAGGT ATTACGCGAC
CTGGGCTTCA AGGCCGCCAC CCGGCAGAGC AAGGCGCTGC CCGACAGCGC CGGCGAAATG
TTCCAGCTGC CCGACGACGA GGCCTGGCTG CGTTTCGCCC GCGAAGGCCT GCCGCGCTTG
CGCCAAGCCG GTTGGAACAT AGACGTCCAG CGCGACTTCG CCTTCAACCT GCAGGAGGTG
GACGACTGGT ATGCGAGCAT CGACGAGGCG CCCGGCCATG AATGGTTCGA CCTGGAGCTT
GGCATTGTGG TCGATGGCCA GCGTCACAGC CTGCTGCCGA TCGTGTTGCA ACTGCTACGC
AGCAGCCCAG AGCTGCTGCG CCCCAGCGAA CTGGCCCGGC GCAGTGACGA CGAGCACCTG
CTGATCGACC TCAACCGTGG TCGCCTGGAC AGCCCGGCCC TGCGCGTCGC CCTCCCGTAT
GGCCGCGTCA AAGCGGTCAT GGCCACCCTG GGCGAGCTCT ACCTGCACGA ACACACAACC
GGCCCGTCCC TGCGCATGGA ACGTGCCGAC GCCGCGCGCC TGAACGAAAT CGAAGGCCTG
CCCCTGCTAT GGGAAGGCGG CGAGCACGTT CGCGACCTGG GCCGGCGCCT GCGCGATGCC
CGTGATTTGC AGGTTGAACC ACCGACAGGG CTGCAGGCCA GCATGCGCCC CTACCAGCAA
CAAGGCCTGA ACTGGTTGCA GGCCCTTCGC GAGATGGGCA CCGGTGGCAT CCTGGGCGAC
GACATGGGCC TGGGCAAGAC CCTGCAGGCC TTGGCCCACT TGCTGCTGGA GAAAGAATCC
GGGCGCTTGA GTACACCGGC ACTGGCGGTC ATGCCCACCA GCCTGATACC CAACTGGCTC
GACGAAGCCC AGCGCTTCGC CCCCGATCTG CGCGTACTGG CACTGCATGG GCCGGGGCGC
AGCAAGCATT TTGCCACGCT GCATGAGTAC GATCTGGTCC TGACCACCTA CGCCCTGATG
CCACGCGACC TCGAACACCT GCGCACGCAG GCCTGGCACG TCCTGGTACT GGACGAGGCG
CAGAACATCA AGAGCAGCAC CAGCAAGGCC GCCCTCGCCG TCTGCGAGCT ACAGGCCGGC
CAGCGCCTGT GCCTGACCGG TACGCCGATG GAAAACAACC TGGGCGAGCT GTGGTCGATC
TTCCACTTCT TGATGCCCGG CTGGCTGGGC GACCTCAAAC GCTTCAACCA GGACTACCGC
ACGCCGATCG AGCGCCACGG CGACAGCGAG CGCATGGCCC ACCTGGCCAG CCGCATCCGC
CCGTTCCTGC TGCGCCGCAC CAAGGAACAG GTGGCCACCG AACTGCCGGC CAAGACCGAG
ATGGTGCACT GGGTCGAACT CAGCGACGCC CAGCGCGATA CCTACGAGGC CGTGCGCGTG
GCCATGGACC AGAAGGTCCG CGACGAAATT GCCCGCAATG GCGCCGCACG CAGCCAGATC
GTCATCCTCG ACGCGCTGCT CAAGCTGCGC CAGGTATGCT GCGACCTGCG CCTGGTCAAG
GGCGTGGAAA GCAAAGGCAA CCAGGCCGAC AAGGGCAAGC TGGGTGCACT GCTGGAAATG
CTCGAAGAGC TGCTCAGCGA AGGCCGCCGC GTGCTGTTGT TCTCGCAGTT CACCTCGATG
CTGGCGCTGA TCGAACAGGA GCTGGAAAAG CGCAAGATCC GCTACAGCTT GCTGACCGGC
GACACGCGCG ACCGTCGCAC ACCCGTGCGG CAGTTTCAGC AGGGTGACAG CGAAGTGTTC
CTGATCAGCC TCAAGGCGGG GGGCGTGGGC TTGAACCTGA CAGCTGCGGA CACCGTGATC
CACTTCGACC CCTGGTGGAA CCCGGCCAGC GAAAACCAGG CCACCGACCG CGCCTACCGC
ATTGGCCAGG ACAAGCCGGT GTTCGTGTTC AAGCTGATTA CCCGGGGGAC GGTGGAAGAG
AAGATTCAGC TGTTGCAGCA GGAAAAGGCG GCGCTGGCGG CCAGCTTGCT GGACGGCGGC
CAAGCCGGGC AGTGGCGGCT TGGCGACGAA GAAATCGAGG CACTGTTTGC GCCGCTGCCT
GGAAAGCGCG GGCGTTGA
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| Protein sequence | MSDGDAQQLL RAYPGWVDFI EAGTMARGRS YAAQERARIL SLHGATIEAI CKGSTGETYQ
QNIRLVVNYG DLRVFGRCSC PVGLNCKHCV AALLQLQDGL DAAGPHEQSA LSLPPDLNLW
VQTLESPSQP ASPQGPARKG PAIYYRIHVD HGVWRLEPIK GTRQADDTLK IGRITSMPEM
LYYTPRYVTE DDARLLRLID SRSETTTPMA QLEGKQGGEL YSYALATGRL LFEDDLAPLS
PGPELHAEFR WVRLDNGSYR GAWYHDDHQQ LRAVPIEPMH YVDRQRHLTG KLRHDLDPFI
ASQLARAPIV PEHLVIPLSH RLNALNRHVP TPTAVSTEHI EDITPKGRLT LGSLEFSAYM
PKTGRMQRQL QHRAALAFDY DDLRTSGNDE KPLTRLVGNT SQRIRRQPQA EQALRKVLRD
LGFKAATRQS KALPDSAGEM FQLPDDEAWL RFAREGLPRL RQAGWNIDVQ RDFAFNLQEV
DDWYASIDEA PGHEWFDLEL GIVVDGQRHS LLPIVLQLLR SSPELLRPSE LARRSDDEHL
LIDLNRGRLD SPALRVALPY GRVKAVMATL GELYLHEHTT GPSLRMERAD AARLNEIEGL
PLLWEGGEHV RDLGRRLRDA RDLQVEPPTG LQASMRPYQQ QGLNWLQALR EMGTGGILGD
DMGLGKTLQA LAHLLLEKES GRLSTPALAV MPTSLIPNWL DEAQRFAPDL RVLALHGPGR
SKHFATLHEY DLVLTTYALM PRDLEHLRTQ AWHVLVLDEA QNIKSSTSKA ALAVCELQAG
QRLCLTGTPM ENNLGELWSI FHFLMPGWLG DLKRFNQDYR TPIERHGDSE RMAHLASRIR
PFLLRRTKEQ VATELPAKTE MVHWVELSDA QRDTYEAVRV AMDQKVRDEI ARNGAARSQI
VILDALLKLR QVCCDLRLVK GVESKGNQAD KGKLGALLEM LEELLSEGRR VLLFSQFTSM
LALIEQELEK RKIRYSLLTG DTRDRRTPVR QFQQGDSEVF LISLKAGGVG LNLTAADTVI
HFDPWWNPAS ENQATDRAYR IGQDKPVFVF KLITRGTVEE KIQLLQQEKA ALAASLLDGG
QAGQWRLGDE EIEALFAPLP GKRGR
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