Gene PputGB1_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1684 
Symbol 
ID5869464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1906211 
End bp1906918 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID641546801 
ProductTetR family transcriptional regulator 
Protein accessionYP_001667923 
Protein GI167032692 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.46279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0995016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAT CGGAAACCGT TGAACGCATT CTCGATGCTG CCGAGCAGCT GTTCGCGGAA 
AGGGGGTTCG CCGAAACCTC GTTGCGGCTG ATTACCAGCA AGGCCGGGGT CAACCTGGCG
GCCGTCAACT ATCACTTCGG CTCCAAGAAG GCACTGATTC AGGCGGTGTT CTCGCGCTTC
CTCGGCCCGT TCTGCACCAG CCTCGAGCGT GAGCTGGAGC GGCGCCAGGC CAAGCCGGAG
CACAAGCCGA CCCTCGAAGA ACTGCTGGAA ATGCTGGTAG AGCAGGCGTT GGCCGTGCAG
CCGCGCAGCA ACAACGACCT GTCGATCTTC ATGCGCCTGC TGGGCCTGGC GTTCAGCCAG
AGTCAGGGCC ACCTGCGGCG TTATCTGGAA GACATGTACG GCAAGGTGTT CCGCCGCTAC
ATGCTGCTGG TCAACGAGGC TGCGCCACGC ATTCCGCCAC TGGAGCTGTT CTGGCGCGTC
CACTTCATGC TTGGTGCTGC GGCCTTCAGC ATGTCCGGTA TCAAGGCCCT GCGGGCGATT
GCCGAGACCG ACTTTGGTAT CAACACCTCG ATCGAGCAGG TGATGCGCCT GATGGTGCCG
TTCCTGGCCG CAGGCATGCG CGCCGACAGC GGTGTCACCG ACGATGCCAT GGCCACTGCG
CAGTTGCGCC CGCGCACCAA GATCAGTAGC GCCACAGCCA AGGCCTGA
 
Protein sequence
MAQSETVERI LDAAEQLFAE RGFAETSLRL ITSKAGVNLA AVNYHFGSKK ALIQAVFSRF 
LGPFCTSLER ELERRQAKPE HKPTLEELLE MLVEQALAVQ PRSNNDLSIF MRLLGLAFSQ
SQGHLRRYLE DMYGKVFRRY MLLVNEAAPR IPPLELFWRV HFMLGAAAFS MSGIKALRAI
AETDFGINTS IEQVMRLMVP FLAAGMRADS GVTDDAMATA QLRPRTKISS ATAKA