Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1637 |
Symbol | |
ID | 5869416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1850916 |
End bp | 1851860 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641546753 |
Product | restriction endonuclease-like protein |
Protein accession | YP_001667876 |
Protein GI | 167032645 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAACC GCCCTGAGTT TGTACTAGAC GAAGCCGCCG CCTCAACACA CAACCCACCC GGCTGGGTTG CCCGGTACCT GAAGATTCCC CATCAGGGTA AAGCACCCAA GCACTACGGT CCCCAAGCAT ATAGATTTTC TGCCCCAATG ACGCTCAGCG TCATCTTACC TAGGAGGGGC TGGACCCTTC TAAAAAAGAC CAAAAATTAC GCCTATTTCA TGCCGCCGCC AGGTGTGATG CCACCGTTCC AAATAACGAT CATGGTCCCG TCAGAAGATG AATGCCTCAA TTTGGCAAAA CGGGCTTATG ACCGAGGCTT CTCGTGGCAG GCCCAACTAG GCGAATGGCT TGCGTTGTAC CTTCACGAGC GACCGCAGGA AAGCCGAGAG ATGTGGCGAA ACCCAACTAC TGGGCAGATG GAGAGCCGAC TACACGTTAG TAGTCCTCAA TCCAGCCTTC ACATCGGTGA GTGGGGTGTC TGGGAGGCAG TAGTAACGGG TGTAGATGGG GCGTTCAGAA TCGGGTATCA GCATCACACG AATATCGCCA TACCACCACC AACGTCGCCT CTCCAACCGC CCCGTCCTCC AGAGAGCCTT TCTCTCCTTG AGGGCGCCGT ACGAACAGTT GAGTTGACAC GATACGAACG GAATCCAACA GCCCGTCGCC TTTGTATTGC GCACTACGGT CCGACCTGTC AAGCATGCGG GCTGAATTAC GAAATCAAGT ACGGCCCTAT CGCCGTAGAC CTCATACACG TACATCATCT GACGCCACTT GCAGCCATCG GAGAGTCATA CCAAGTCGAC CCCATTCGAG ACCTGGTTCC TCTATGCGCG ACATGCCACC ACGTCGTTCA CGCGAAAACT CCCCCGTACA CGCCTGAAGA GCTAAGAGTT TGCATTCTCG CCGCTAAGTA TGACCCGGAA AAAAATGATG CATAG
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Protein sequence | MTNRPEFVLD EAAASTHNPP GWVARYLKIP HQGKAPKHYG PQAYRFSAPM TLSVILPRRG WTLLKKTKNY AYFMPPPGVM PPFQITIMVP SEDECLNLAK RAYDRGFSWQ AQLGEWLALY LHERPQESRE MWRNPTTGQM ESRLHVSSPQ SSLHIGEWGV WEAVVTGVDG AFRIGYQHHT NIAIPPPTSP LQPPRPPESL SLLEGAVRTV ELTRYERNPT ARRLCIAHYG PTCQACGLNY EIKYGPIAVD LIHVHHLTPL AAIGESYQVD PIRDLVPLCA TCHHVVHAKT PPYTPEELRV CILAAKYDPE KNDA
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