Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1608 |
Symbol | rlmL |
ID | 5869388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1815311 |
End bp | 1817503 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546726 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_001667849 |
Protein GI | 167032618 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.159338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACC GTTTCGAACT TTATCTCACC TGCCCTAAAG GCCTTGAAGG CCTGCTTGCC GAAGAGGCCA AGGGCCTTGG CCTTGAAGAG GTGCGCGAGC ACACCTCGGC CATTCGCGGC GCCGCCGACA TGGAAACCGC CTACCGCCTG TGCGTATGGT CTCGCCTGGC CAACCGGGTA CTGTTGGTAC TCAAGCGCTT CAGCATGAAG AACGCCGATG ACCTTTACGA TGGCGTCAAT GCCGTCGACT GGGCCGACCA CCTGGCGGCT GACGGCACGC TGGCGGTTGA ATTCAGCGGC CATGGCTCGG GCATCGACAA CACCCACTTC GGTGCGCTGA AGGTCAAGGA TGCGATCGTC GACAAGCTGC GCAATCGCGA GGGCCTGCGC CCGTCGGTGG AAAAGATCGA CCCGGACGTG CGCGTGCACC TGCGCCTGGA CCGCGGCGAG GCCATCCTCT CCCTCGACCT GTCCGGCCAC AGCCTGCACC AGCGTGGCTA CCGCCTGCAG CAGGGCGCCG CGCCATTGAA AGAAAACCTG GCGGCAGCGG TGTTGATCCG TTCCGGCTGG CCGCGCATTG CCGCCGAAGG CGGCGCACTG GCCGACCCGA TGTGCGGCGT GGGTACCTTC CTGGTCGAGG CGGCGATGAT CGCTGCCGAC ATCGCCCCCA ACCTCAAACG TGAACGCTGG GGCTTCAGTG CCTGGCTCGG CCACGTGCCG GCGTTGTGGC GCAAGGTGCA TGACGAAGCG CAGGCCCGCG CGCAGGCTGG CCTCGCCAAG CCACCTCTGT GGATCCGTGG CTACGAGGCC GACCCGCGGC TGATCCAGCC GGGCCGCAAC AACGTCGAGC GTGCCGGCCT GGGCGACTGG GTGAAGATCT ACCAGGGCGA AGTCAGCACG TTCGAGCCAC GCCCGGACCA GAACCAGAAA GGCCTGGTCA TCAGTAACCC GCCCTACGGC GAGCGTCTGG GTGACGAGGC CAGCCTGCTG TACCTCTACC AGAACCTCGG CGAGCGCCTG CGCCAGGCTT GCATGGGCTG GGAGGCGGCG GTGTTCACCG GCGCACCGCA GCTGGGCAAG CGCATGGGTA TTCGCAGCCA CAAGCAATAC GCGTTCTGGA ACGGCGCCTT GCCGTGCAAG CTGTTGCTGT TCAAGGTGCA GCCTGACCAG TTCGTCACTG GCGAACGCCG TGAGGCGCAG CCTGAAGGCA CCGAAGTCCG CCAGCAGGCC CCGCAGGCCA GCGAGCCGGC GCGGCTGTCG GAAGGGGCGC AGATGTTTGC CAATCGCCTG CAGAAAAACC TCAAGCAACT GGGCAAGTGG GCCCGTCGCG AGCAGATCGA CTGCTACCGC CTGTACGATG CCGACATGCC CGAATATGCC CTGGCGGTCG ACCTGTACCA GGACTGGGTC CATGTGCAGG AGTACGCTGC GCCACGTTCG ATCGACCCGG ACAAGGCCCA GGCCCGCCTG CTCGATGCGC TGGCGGCTAT CCCGCAGGCG CTGGGCATTT CGCCGCAACG TGTGGTGCTC AAACGACGCG AGCGCCAGAG CGGCACGCGC CAGTATGAGC GCCAGGCGAC CGAGGGCCGT TTCCAGGAGG TCAACGAAGG TGGCGTCAAG TTGCTGGTCA ACCTTACCGA CTACCTCGAT ACAGGGCTGT TCCTCGACCA CCGCCCGATG CGCATGCGCA TTCAGCGCGA AGCGGCCGGC AAGCGCTTCC TCAACTTGTT CTGCTACACC GCCACGGCCA CCGTGCATGC GGCCAAGGGC GGTGCGCGCA GCACCACCAG TGTCGACTTG TCGAAAACCT ACCTGGACTG GGCACGGCGC AACCTGGCGC TCAATGGCTA CTCCGAGCGC AACCGCCTTG AGCAGAGCGA TGTGATGGCC TGGCTGGAAG GTAACCGCGA CAGCTACGAC CTGATCTTCA TCGACCCGCC AACCTTCTCC AACTCCAAAC GCATGGAAGG CGTGTTCGAC GTGCAGCGTG ACCATGTGCA ACTGCTGGAC CTGGCCATGG CCCGCCTGGC ACCGGGCGGC GTGCTGTATT TCTCCAACAA CTTCCGCAAG TTCCAGTTGG ACGAGCATCT GATGGCACGT TATGCCGTGG AGGAAATCAC CGCCCAGACG CTGGACCCGG ACTTTGCCCG TAACAACCGG ATCCACCGCG CCTGGCGCCT GCAATTGCGT TGA
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Protein sequence | MSDRFELYLT CPKGLEGLLA EEAKGLGLEE VREHTSAIRG AADMETAYRL CVWSRLANRV LLVLKRFSMK NADDLYDGVN AVDWADHLAA DGTLAVEFSG HGSGIDNTHF GALKVKDAIV DKLRNREGLR PSVEKIDPDV RVHLRLDRGE AILSLDLSGH SLHQRGYRLQ QGAAPLKENL AAAVLIRSGW PRIAAEGGAL ADPMCGVGTF LVEAAMIAAD IAPNLKRERW GFSAWLGHVP ALWRKVHDEA QARAQAGLAK PPLWIRGYEA DPRLIQPGRN NVERAGLGDW VKIYQGEVST FEPRPDQNQK GLVISNPPYG ERLGDEASLL YLYQNLGERL RQACMGWEAA VFTGAPQLGK RMGIRSHKQY AFWNGALPCK LLLFKVQPDQ FVTGERREAQ PEGTEVRQQA PQASEPARLS EGAQMFANRL QKNLKQLGKW ARREQIDCYR LYDADMPEYA LAVDLYQDWV HVQEYAAPRS IDPDKAQARL LDALAAIPQA LGISPQRVVL KRRERQSGTR QYERQATEGR FQEVNEGGVK LLVNLTDYLD TGLFLDHRPM RMRIQREAAG KRFLNLFCYT ATATVHAAKG GARSTTSVDL SKTYLDWARR NLALNGYSER NRLEQSDVMA WLEGNRDSYD LIFIDPPTFS NSKRMEGVFD VQRDHVQLLD LAMARLAPGG VLYFSNNFRK FQLDEHLMAR YAVEEITAQT LDPDFARNNR IHRAWRLQLR
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