| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1603 |
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| Symbol | |
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| ID | 5869383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1810058 |
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| End bp | 1811269 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546721 |
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| Product | nitrite transporter |
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| Protein accession | YP_001667844 |
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| Protein GI | 167032613 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.966318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00836946 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACCA GCTTCTGGAA ATCCGGGCAT GTGCCCACGC TGTTCGCCGC GTTCCTGTAC
TTCGACCTCA GCTTCATGGT GTGGTACCTG CTGGGCCCAC TGGCGGTGCA GATTGCTGCC
GACCTGCAAC TGAGCGCACA ACAACGGGGC CTGATGGTGG CCATGCCGAT CCTGGCCGGG
GCTATCCTGC GCTTTGCCAT GGGCGTGCTG GTGGACCGCC TGTCACCCAA GACCGCCGGC
CTGATCGGCC AGGTGGTGGT TATCGTCGCA CTGGCCGCAG CCTGGCACCT GGGCGTGCAC
AGCTATGAAC AAGCGCTGCT GCTGGGGGTG TTTCTGGGGT TCGCGGGTGC TTCGTTCGCT
GTGTCGCTGC CACTGGCTTC GCAGTGGTAC CCGCCACAGC ACCAGGGCAA GGCCATGGGC
ATCGCCGGCG CCGGCAACTC CGGCACCGTG TTCGCCGCCC TGCTGGCGCC GGCGCTGGCT
GCAGGCTTTG GCTGGAACAA TGTGTTCGGC TTTGCGCTGA TCCCGTTGAC ACTGGCGCTG
GCGGTGTTCG CCCTGCTGGC GCGTAACGCC CCACAACGGC CCAAACCGAA AGCCATGGCC
GACTACCTCA AGGCCCTGGG TGACCGAGAC AGCTGGTGGT TCATGTTCTT CTACAGCGTC
ACCTTCGGTG GCTTCATCGG CCTGGCCAGC GCCCTGCCCG GCTATTTCAG CGACCAGTAC
GGCCTGAGCC CGATCACCGC CGGCTATTAC ACCGCAGCTT GCGTGTTCGC CGGCAGCCTG
ATGCGCCCGC TCGGCGGCGC GCTGGCTGAC CGTTTTGGCG GCATCCGTAC CCTGTTGGGC
ATGTACAGCG TGGCAGCTAT CTGCATCGCC GCAGTTGGTT TCAACCTGCC CTCTGCCGCA
GCCGCACTGG CGCTGTTCGT CAGCGCCATG CTTGGCCTGG GCGCCGGCAA CGGCGCGGTG
TTCCAGCTGG TGCCGCAACG TTTTCGCCAG GAAATCGGTG TAATGACCGG GCTGATCGGC
ATGGCCGGCG GCATTGGCGG TTTCCTGCTG GCGGCCGGGC TTGGCACTAT CAAGCAGCAC
ACCGGCGACT ACCAACTTGG CTTGTGGCTG TTCGCCAGCC TGGGCCTGCT GGCGTGGTTT
GGCCTGCATG GCGTGAAACA GCGCTGGCGC ACCACCTGGG GCTCGGCTGC AGTCACGGCA
GCACGGGTCT GA
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| Protein sequence | MSTSFWKSGH VPTLFAAFLY FDLSFMVWYL LGPLAVQIAA DLQLSAQQRG LMVAMPILAG
AILRFAMGVL VDRLSPKTAG LIGQVVVIVA LAAAWHLGVH SYEQALLLGV FLGFAGASFA
VSLPLASQWY PPQHQGKAMG IAGAGNSGTV FAALLAPALA AGFGWNNVFG FALIPLTLAL
AVFALLARNA PQRPKPKAMA DYLKALGDRD SWWFMFFYSV TFGGFIGLAS ALPGYFSDQY
GLSPITAGYY TAACVFAGSL MRPLGGALAD RFGGIRTLLG MYSVAAICIA AVGFNLPSAA
AALALFVSAM LGLGAGNGAV FQLVPQRFRQ EIGVMTGLIG MAGGIGGFLL AAGLGTIKQH
TGDYQLGLWL FASLGLLAWF GLHGVKQRWR TTWGSAAVTA ARV
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