Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1598 |
Symbol | |
ID | 5869378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1804871 |
End bp | 1805695 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546716 |
Product | TM helix repeat-containing protein |
Protein accession | YP_001667839 |
Protein GI | 167032608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0082628 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00441813 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAACTCG ATCTCTGGAC CCAGAGCCTG GTCACCGCGA TGACCGCCCT TTGGACCAAG GTGGCGAACT TCATCCCTAA CCTGTTCGGC GCGCTGGTCG TGGTGCTGCT CGGTTTCGTG GTGGCCAAGC TGCTCGACAC GCTGCTGTCC AAGCTGCTGG CCAAGTTTGG CCTGGACCGC CTGATGGCCG GCACTGGCCT CACCAAGATG CTTGGTCGGG TTGGCATCCA AGTGCCGATC TCGACCTTGA TCGGCAAGAT CGTCTACTGG TTCGTGCTGC TCATCTTCCT TGTCTCGGCC GCTGAGTCGC TGGGCCTGGA ACGGGTTTCG GCCACCCTCG ACATGCTCGC CCTGTACCTG CCCAAGGTAT TCGGCGCCGC CCTGGTGCTG CTGGCTGGCG TGCTGCTGGC ACAGGTTGCC AACGGTCTGG TTCGTGGCGC CGCCGAAGGT ATCGGCCTAG AGTACTCGGC GGGGCTTGGG CGTATTACCC AGGGCCTGGT GATCATCATC AGCATCTCGG TAGCCATCAG CCAGCTGGAG GTGAAAACCG ACCTGCTGAA CCACGTCATC GTTATTGGGC TGATTACCGT TGGTCTGGCC GTTGCGCTGG CCATGGGCCT CGGCAGCCGC GAAATCGCCG GGCAGATCCT GGCCGGTATT TATGTGCGCG AGCTGTACCA GGTAGGCCAG CAAGTGCGGA TTGGAGAGGT CGAAGGGCAT ATCGAGGAGA TCGGTACGGT GAAGACGACG CTGCTGACCG ATGATGGCGA AATGGTGTCA CTGTCTAACC GCGAGCTGCT TGAACAGCGT GTCAATAGCC GCTAA
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Protein sequence | MELDLWTQSL VTAMTALWTK VANFIPNLFG ALVVVLLGFV VAKLLDTLLS KLLAKFGLDR LMAGTGLTKM LGRVGIQVPI STLIGKIVYW FVLLIFLVSA AESLGLERVS ATLDMLALYL PKVFGAALVL LAGVLLAQVA NGLVRGAAEG IGLEYSAGLG RITQGLVIII SISVAISQLE VKTDLLNHVI VIGLITVGLA VALAMGLGSR EIAGQILAGI YVRELYQVGQ QVRIGEVEGH IEEIGTVKTT LLTDDGEMVS LSNRELLEQR VNSR
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