Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1586 |
Symbol | |
ID | 5869366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1788942 |
End bp | 1789877 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546704 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_001667827 |
Protein GI | 167032596 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.546792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.198446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCA AGACACTCGA AGCCGCTGCC ACCTGGTATG TACAGCTCAA CGACGGCGCC AACAGCGAGG CCCGCACCCA GGCCTGGCGG CAGTGGTTGC AGGCCAGCCC ACAACACGCT GCCGCCTGGG CGCGAGTAGA AAAGCTGCAG CAACAGTGGG CCATGCTGCC ACCACAGGCG GCGCTGTCCA GCCTCGGCGC GGCACAGGCG CAGCGGCGCG AAGTGCTGAA GGTGCTGAGC CTGTTGCTGG CGATGGGCGC AGGTGGCTGG CTGGCCGCCG AGCAGGTGCC CTATCGCTCC CTGCTGGCCC AACAACGTAC CGGCAGCCGC GAACGAAGCA CCCTGCAATT GGTGGACGGC TCGCAGTTGG AGCTGAACGT GGGCACCGCG CTGGACGTGC GCTATGACGC GAAAGTGCGG GCGATTCAGC TGTATCAAGG GGAAATTCTG GTCCGCCCGG TCAGCGACCT TCAGCAGCGC CCATTCATCG TGCACACCGA TGACGGCAGC GTGCTTGCCC GCAGTACCGA GTTCAGCATC CGCAAACTTG CGCGCCAGAC CCGCGTGGGC GTGCTTCAGG GCAGCGTCGA GGTACGTCCA CAGCGCCACC TTGATCGGCT GCTGCAACTG CAAGCGGGCC AACAAGTGAG TTTTGACCAG GATGACTTCG CCACCGCCCA GGCTCTACCC GCCGATTCCA CGGCCTGGCT GCAGGGCATG CTGAGCGTTA ACGACTGGCG GCTGGGCGAC TTCATCGAAG AACTGGGGCG CTATCGGCCA GGCGTGCTGC GCTGCGCCTC CGCAATCCGG GCCATGAGTA TCTCCGGAGC ATTTCGCATC GATGATACCG ATATCGCTTT GGCCAACCTG CCGAAAACCC TCCCTGTGAG GGTGCACTAC CTCAGCCGCT ATTGGGTGAG CGTGGAGCCT GCCTGA
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Protein sequence | MDLKTLEAAA TWYVQLNDGA NSEARTQAWR QWLQASPQHA AAWARVEKLQ QQWAMLPPQA ALSSLGAAQA QRREVLKVLS LLLAMGAGGW LAAEQVPYRS LLAQQRTGSR ERSTLQLVDG SQLELNVGTA LDVRYDAKVR AIQLYQGEIL VRPVSDLQQR PFIVHTDDGS VLARSTEFSI RKLARQTRVG VLQGSVEVRP QRHLDRLLQL QAGQQVSFDQ DDFATAQALP ADSTAWLQGM LSVNDWRLGD FIEELGRYRP GVLRCASAIR AMSISGAFRI DDTDIALANL PKTLPVRVHY LSRYWVSVEP A
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