| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1581 |
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| Symbol | |
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| ID | 5869361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1780774 |
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| End bp | 1783854 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546699 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001667822 |
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| Protein GI | 167032591 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.270184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTTA CCGATGTCTT CGTGCGCCGG CCGGTGCTGG CGCTGGTGGT CAGCAGCCTG
ATCATCCTGA TGGGGCTGTT TGCCATGGGC AAATTGCCGA TCCGCCAGTA CCCCTTGCTG
GAAAGCTCGA CCATTACCAT CAGTACCGAG TACCCCGGCG CCTCCGCCGA GCTGATGCAG
GGTTTTGTGA CCCAGCCGAT TACCCAGGCG GTGTCGTCGG TCGAGGGCAT CGACTACCTG
TCGTCGTCCT CGCAGCAGGG GCGCAGCCTG ATCACGTTGC GCATGGTGCT CAACCGCGAC
TCGACCCAGG CGCTGGCCGA GACCATGGCC AAGGTCAACC AGGTGCGCTA TCGCCTGCCG
GAAAAGGCCT ACGACCCGGT GGTAGAGCTT TCGGCTGGCG ACTCCACGGC GGTAGCCTAC
GTGGGCTTTG CCAGCGACAG CCTGTCGATA CCGGAGCTGA GCGATTACCT GTCGCGGGTG
GTGGAACCGC AGTTTTCTGG CATCGACGGC GTGGCCAAGG TGCAGTCGTT TGGCGGGCAG
CGCCTGGCCA TGCGCCTGTG GCTGGACAGT GAACAGATGG CTGGGCGCGG GGTGACAGCA
GCGGACGTGG CGCAGGCGGT GCGGGCCAAC AACTACCAGG CGACGCCGGG CCAGGTGCGC
GGACAATACG TGCTGGCCGA CATCCAGGTG GACACCGACC TGACCCGGGT CGAGGACTTC
CGTGAGCTGA TCATTCGCAA CGATGGCACC GATTTGGTAC GCCTGCGCGA TGTCGGCACC
GTCGAGCTGA ATGCGGCGGC CACCCAGACC AGCGCCACCA TGGATGGCAG GCCTGCCGTG
CACCTGGGGC TGTTCCCCAC GCCGACCGGC AACCCACTGG TGATCGTCGA GGGTATTCGC
CAACTGTTGC CGCAGATTCA GCAGACCCTG CCACCCGGTG TGCATGTGGC GCTGGCCTAC
GAGACCGCAC GTTTCATCGA CGCTTCGATC CATGAAGTGC TGCGCACCTT GGTGGAGGCG
ATGCTGATCG TGGTGCTGGT GATCTGGCTG TGCCTGGGTT CGCTGCGCAG CGTGCTGATT
GCGGTGGTTG CCATCCCGCT GTCGATGCTC GGTGCCGCGG GCCTGATGTT GCTGTTCGGC
TTCAGCCTCA ACCTGCTGAC GTTGCTGGCG ATGGTGTTGG CCATCGGCTT GGTGGTGGAC
GATGCCATCG TGGTGGTGGA GAACGTGCAC CGGCATATCG AAGAGGGCAG GTCACCGGTC
GCTGCGGCAT TGATCGGGGC ACGGGAAATC GCCGGGCCGG TGATCGCCAT GACCCTGACC
CTGGCGGCGG TGTATGCGCC GATCGGGCTG ATGGGCGGGC TGACCGGCAC GCTGTTCCGC
GAATTTGCCC TGACCTTGGC GGGAGCGGTG ATCGTTTCGG GCATCGTGGC GCTGACGTTG
TCGCCGGTAA TGAGCTCGTT GCTATTGCAA CCCGGACAGC AGCATGGCGC GATGGCCAAC
ATGGCCGATC GGTTGTTCGC TGGGTTGACT GGCGCCTATG GACGGGTGCT GGCCTACACC
CTGACACATC GCTGGATCAG TGGCGGCGTG GCGCTGCTGG TGTGCCTGAG CCTGCCCTGG
CTGTACCTGC TGCCCCAGCG TGAGCTGGCC CCGGCCGAGG ACCAGGCGGC GGTGCTGACC
GCCATCAAGT CGCCGCAGCA TGCCAGCTTG GAATATGTGG AGCACTTTGC GCTGAAACTG
GACGAGGTGA TGAAGTCCAT CGGCGAAACC ACCGACACCT GGATCATCAA CGGCACCGAC
GGCCCGGCCG CCAGTTTTGG TGGCATCAAC CTCAGCGCCT GGCAGGTGCG CGAGCGTTCT
GCCGCGCAGG TGCAGGCACA GTTGCAGCAG GCAGTGGCGG ATATCGAAGG CAGCAGCATC
TTCGCCTTCC AGGTCGCTTC GCTGCCGGGT TCCAGTGGCG GCCTGCCGGT GCAGATGGTG
CTGCGCAGTG CCCAGGATTA CCCCGAGCTG TACCAGACCA TGGAGGTGCT CAAGCAGCGC
GCCCGCGACA GCGGGCTGTT TGCCGTGGTG GACAGCGACC TCGACTACAA CAACCCAGTG
GTCAAGGTGC GCGTCGACCG CGCCAAGGCG GCTAGCCTGG GCATCAGCAT GCAGGCCATT
GGCGAGTCGC TGGGGGTGCT GGTGGGCGAG CAGTACCTCA ACCGTTTCGC CCTGTTCGGG
CGGTCCTATG ACGTGATCCC GCAGAGTATT CAGGACCAGC GCCTGACGCC TGCGGCGCTC
AATCGTCAAT ACGTGCGCGC CGAAAACGGC AGCCTGGTGC CGTTGGCTAC GGTGGTGCAC
CTGGATATCG AGGTGGCGCC CAACCGCCTA TTGCAGTTCG ATCAGCAGAA CGCCAGTACC
CTGCAGGCGA TCCCGGCGCC AGGAGTGTCG ATGGGCAACG CCGTGGCATT TCTCGAACAG
CTCACCACCG AACTGCCGCC GGGCTTCAGC CACGATTGGC AATCGGAGTC GCGCCAGTAT
GTGCAGGAGG GTTTTGCCTT GATGTGGGCG TTTCTCGCTG CCTTGGTGGT GATCTACCTG
GTGCTGGCGG CGCAGTACGA AAGCCTGGTC GACCCGTTGA TCATTCTGGT GACCGTGCCG
CTGTCGATCT GCGGCGCACT GCTGCCGCTG GCGCTGGGCT GGGCCACGTT GAACATCTAC
ACGCAGATTG GCCTGGTGAC GCTGATCGGC CTGATCAGCA AGCACGGCAT CCTGATGGTG
GAGTTCGCCA ACGAGATCCA GGTGCGCGAC AACCTTGATC GTGCTGCCGC CATTGTCCGA
GCTGCGCAGA TACGCTTGCG GCCGGTGCTG ATGACCACGG CGGCGATGAC CTTTGGCGTG
CTGCCACTGC TGTTCGCCAG TGGCGCCGGG GCCAATAGCC GCTTCGGGCT GGGGGTGGTG
ATTGTGTGCG GGATGCTGGT GGGTACGTTG TTTACCTTGT TCGTGTTGCC GACGATCTAT
GGGTGGTTGG CGCGAGATCA TCGGGTGACC ACGGGGCGGG CGCAGCAGTT GCTGGAGGCT
GAACGCGTTC TGGGTATGTG A
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| Protein sequence | MKFTDVFVRR PVLALVVSSL IILMGLFAMG KLPIRQYPLL ESSTITISTE YPGASAELMQ
GFVTQPITQA VSSVEGIDYL SSSSQQGRSL ITLRMVLNRD STQALAETMA KVNQVRYRLP
EKAYDPVVEL SAGDSTAVAY VGFASDSLSI PELSDYLSRV VEPQFSGIDG VAKVQSFGGQ
RLAMRLWLDS EQMAGRGVTA ADVAQAVRAN NYQATPGQVR GQYVLADIQV DTDLTRVEDF
RELIIRNDGT DLVRLRDVGT VELNAAATQT SATMDGRPAV HLGLFPTPTG NPLVIVEGIR
QLLPQIQQTL PPGVHVALAY ETARFIDASI HEVLRTLVEA MLIVVLVIWL CLGSLRSVLI
AVVAIPLSML GAAGLMLLFG FSLNLLTLLA MVLAIGLVVD DAIVVVENVH RHIEEGRSPV
AAALIGAREI AGPVIAMTLT LAAVYAPIGL MGGLTGTLFR EFALTLAGAV IVSGIVALTL
SPVMSSLLLQ PGQQHGAMAN MADRLFAGLT GAYGRVLAYT LTHRWISGGV ALLVCLSLPW
LYLLPQRELA PAEDQAAVLT AIKSPQHASL EYVEHFALKL DEVMKSIGET TDTWIINGTD
GPAASFGGIN LSAWQVRERS AAQVQAQLQQ AVADIEGSSI FAFQVASLPG SSGGLPVQMV
LRSAQDYPEL YQTMEVLKQR ARDSGLFAVV DSDLDYNNPV VKVRVDRAKA ASLGISMQAI
GESLGVLVGE QYLNRFALFG RSYDVIPQSI QDQRLTPAAL NRQYVRAENG SLVPLATVVH
LDIEVAPNRL LQFDQQNAST LQAIPAPGVS MGNAVAFLEQ LTTELPPGFS HDWQSESRQY
VQEGFALMWA FLAALVVIYL VLAAQYESLV DPLIILVTVP LSICGALLPL ALGWATLNIY
TQIGLVTLIG LISKHGILMV EFANEIQVRD NLDRAAAIVR AAQIRLRPVL MTTAAMTFGV
LPLLFASGAG ANSRFGLGVV IVCGMLVGTL FTLFVLPTIY GWLARDHRVT TGRAQQLLEA
ERVLGM
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