Gene PputGB1_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1573 
Symbol 
ID5869353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1772320 
End bp1773213 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content63% 
IMG OID641546691 
ProductLysR family transcriptional regulator 
Protein accessionYP_001667814 
Protein GI167032583 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.117572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.71184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATG AGCTGCAAGA CATCAGATCT TTCGTGAAAA TCGCCGAACT CGGCAGTTTC 
CACGAAGCCG CCGAAGCACT TCACCTGTCC CAGCCGGCCT TGAGCCGGCG GATCAAGAAG
CTGGAGGAAG GCCTGGGCAC CTCGCTACTG GAGCGCACCA CCCGCCGGGT CAGCCTGACC
AGCGTGGGCC GCGACTTCCT GCCCAAGGCC AGGCGCCTGC TGGATGATTT TGAAGACTCG
ATCCTCAGCA TTCGCGAGCT GGCCGAGCGC CAGACCGGCC AGGTTACCCT TGCTTGCATC
CCCACCGCAG CGTTCTACTT CCTGCCGTCG GTGATCCGCG ATTACAACGA GCAATACCCG
AAAATCCGCA TTCGCCTGCT GGACCTTAGC GCCAACGACG GGCTCGAAGC CGTGCTGCGC
GGCGAGGCCG ATTTCGGCAT CAACATGATG AGCGGCCAGC ACCCGGACAT CGAGTTTGTC
ACACTGGTGC AAGAGCACTT TGTGCTGGCC TGCAGGCGCG ACCACCCACT GGCGAACCGG
GCCTCCGTTA CCTGGACGGA ACTGGCTGAC TACCGCCTGA TCGGCGTCGG CCGCCTGAGC
GGCAACCGCA TGCTACTGGA CCACGCGTTG TCCGGGCTCA ACCTGCGACC CAAATGGTTC
TACGAAGTGC AACACCTGTC CACGTCGCTG GGCATGGTCG AGGCCGGGCT GGGTGTGTCC
GCCATGCCCA GCCTGGCCAT GCCCGACGCC GACCACCCGA CGCTGGTCAG CGTGCCGCTG
ATCGAGCCGC AGGTTAGCCG CACGCTGGGG TTGGTATACC GGCGCGGCGC ATCGTTGTCG
CCTGCGGCGG AGAAGTTCGT TTCGATCTTG CTGGAGAAAT GGACCAATCG CTGA
 
Protein sequence
MEYELQDIRS FVKIAELGSF HEAAEALHLS QPALSRRIKK LEEGLGTSLL ERTTRRVSLT 
SVGRDFLPKA RRLLDDFEDS ILSIRELAER QTGQVTLACI PTAAFYFLPS VIRDYNEQYP
KIRIRLLDLS ANDGLEAVLR GEADFGINMM SGQHPDIEFV TLVQEHFVLA CRRDHPLANR
ASVTWTELAD YRLIGVGRLS GNRMLLDHAL SGLNLRPKWF YEVQHLSTSL GMVEAGLGVS
AMPSLAMPDA DHPTLVSVPL IEPQVSRTLG LVYRRGASLS PAAEKFVSIL LEKWTNR