Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1559 |
Symbol | |
ID | 5869339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1755960 |
End bp | 1757594 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641546677 |
Product | hypothetical protein |
Protein accession | YP_001667800 |
Protein GI | 167032569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.545989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.355299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGCT TCGGCGTCTT TCTCCTCACC CTGCTATGGG CCGTTCTGGC TCAGGCCGAA CCGCTGCTGC AAGCCAGCGT CGACCGCACT CGCCTGGAGG CCGGCGAAAG CCTGGAACTG ACCCTGGAAA GCCAGGACGT TACCCAGTTC GGCAAGCCCG ACCTACGCGC CCTGGAAGGT GACTTCGAAG TGCGCGGCAC GCGCCAGCTG AACAGCTTGC ATACCCTCGA CGGCGAAACC CGCGCCAGTA CCCGCTGGAT CATCACCCTG CTGCCACGGC GCAGCGGCAG CCTGCGCATT CCCGAGCTGC AACTGGGCCA GTCGCACAGC CAGGCCATCG AACTGCAAGT GCTGCAAGCC GATGCCAGCC GCCCGGACAG CGCCTCACAG GTGTTCATCG AGGCCACCCT CGACAGCAAC GACGTCTATG TCCAGGCACA GGCCGTGCTC ACCCTGCGCA TCTACCACTC GGTAGCCCTG TACGACGACA GCAGCCTGAC CCCGCTGCAA CTGGAGAACG CCAAGGTCGA GCCACTGGGC GAATCACGCA CCTATGAAAA GGAAATCAAC GGCGTGCGTC ACGGCGTGAT CGAAACCCGC TATGCAGTGT ACGCCCAGCA AAGCGGCAGC CTCGACATCC CGCCACTGAC GTTCACCGCC ACGGCCGCCG CCAGCAACGA CGAGGCGCCA CAGGCCAACG GCACCGCTCG CGCCGGCCGC CAGGTGCAGG TCAGCTCGCT GCCGTTGCGC CTCACCGTAC GGCCTGTTCC GGCCGCTTGG CCCGCCGGCG TGCCGTGGCT GCCAGCGCGC AACCTGACCC TGGAAGAGCA CTGGAACCCC GACCCCGGCA GCCAGAAGGT GCAAATTGGC GACTCACTGA CGCGCAACAT CACCTTGCGT GCCGAAGGCT TGTCCAGCAC CCAACTGCCG CCGCTGCCGG CCACGGAGAT CATCGGCCTG CGCCGCTACC CCGACCAGCC GCTGTTGCGC AACGAAATCA ACGAACGCGG CATGACCGCC AACCGCGAAG AGCGCGAAGC CCTGGTGCCC ACCCACGCCG GCACGTTGGC CTTACCGGCG CTGGAAGTGG CCTGGTGGAA CACCCGCGAA GACCACTTGG AACACAGCAG TTTGCCAGCG CGCACCTTGA ACGTGCAGGA CAACCCGGCG CTGAGCGCCG ACACCCCGGT GGGCGAAAAC AGCAACGCCA GTACCCTGCT GTGGCCTTGG CAGCTAGCCA CACTGCTGTT CGCCCTGACC ACCGTGCTGG GCTTTGCCCT GTGGTGGCGC GCCCGCTCGC GGCCTGCGGT GCTGCGTGCC GCGCAGAACG GGCCAAGCCC GCGTACCCTG CTGGATGACC TCAAGCGCGC GTGCCAGGCC AACGACCCAC AGGCCACGCG CCAGGCGCTG GATGCCTGGG CCCGGCAACA GCCGGAAACC CTGGCCGAGA TGGCGGCGCG CTTCGTGCCG TTGTCGGATG CGCTGGATGG GTTGAACGGG GCGTTGTACA GCGAGAGTGG CCAATATTGG CAGGGGGAGG ATTTGTGGCG GGCGATCGGG ACGATTCCGC CGGCCGAGCA GGTGCTGTTG CCGGCGGGTG AGACCGGCAC CTTGCCGCCG CTTTATCCCA AGTAA
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Protein sequence | MSRFGVFLLT LLWAVLAQAE PLLQASVDRT RLEAGESLEL TLESQDVTQF GKPDLRALEG DFEVRGTRQL NSLHTLDGET RASTRWIITL LPRRSGSLRI PELQLGQSHS QAIELQVLQA DASRPDSASQ VFIEATLDSN DVYVQAQAVL TLRIYHSVAL YDDSSLTPLQ LENAKVEPLG ESRTYEKEIN GVRHGVIETR YAVYAQQSGS LDIPPLTFTA TAAASNDEAP QANGTARAGR QVQVSSLPLR LTVRPVPAAW PAGVPWLPAR NLTLEEHWNP DPGSQKVQIG DSLTRNITLR AEGLSSTQLP PLPATEIIGL RRYPDQPLLR NEINERGMTA NREEREALVP THAGTLALPA LEVAWWNTRE DHLEHSSLPA RTLNVQDNPA LSADTPVGEN SNASTLLWPW QLATLLFALT TVLGFALWWR ARSRPAVLRA AQNGPSPRTL LDDLKRACQA NDPQATRQAL DAWARQQPET LAEMAARFVP LSDALDGLNG ALYSESGQYW QGEDLWRAIG TIPPAEQVLL PAGETGTLPP LYPK
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