| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1506 |
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| Symbol | |
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| ID | 5869276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1689392 |
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| End bp | 1690942 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546614 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001667747 |
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| Protein GI | 167032516 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTG ATACGTTGCT CCGCCCCACT GCGGAGCCGA CTCGGCGCGA CTGGATCGCA
GTGATGAGCG TGATGCTCGG TGCCTTCATG GCGGTGCTGG ACATCCAGAT CACCAACTCC
TCGTTGAAGG ACATTCAGGG CGCATTGTCA GCGACGCTGG AAGAAGGCTC ATGGATTTCC
ACTTCGTACC TGGTGGCGGA AATCATCATG ATCCCGCTGA CGGCCTGGCT GGTACAGCTG
CTGTCGGCGC GGCGCCTGGC CGTGTGGGTA TCGGGCGGCT TCCTGCTGTC GTCGCTGCTG
TGCTCGATGG CCTGGAACCT GGAGAGCATG ATCCTGTTTC GCGCCTTGCA GGGTTTCACC
GGCGGCGCGC TGATTCCGCT GGCATTTACC CTGACACTGA TCAAGCTGCC CGAGCACCAC
CGCGCCAAGG GCATGGCGAT GTTCGCCATG ACCGCCACTT TCGCGCCCTC CATCGGCCCC
ACCCTGGGCG GCTGGCTGAC CGAGAATTGG GGCTGGGAGT ACATCTTCTA CATCAACATC
CCACCAGGCC TGGTGATGAT TGCCGGCCTG ATGTATGGCC TGGAGAAGAA AGAAGCGCAC
TGGGAACTGC TGAAAAGCAC CGATTACGCC GGCATCGTCA CCCTGGGCCT GGGGTTAGGC
TGCCTGCAGG TGTTTCTGGA AGAAGGCCAC CGCAAGGACT GGCTGGAGTC GAACCTCATC
GTCGGCCTGG GGAGTGTGGC CCTGGTCAGC CTGATCACCT TCGTCATCTT GCAGTTTTCC
AAACCGCACC CGCTGATCAA CCTGCGCATC CTGGGTAACC GCAACTTCGG CCTGTCGAGC
ATCGCCAGCC TGGGCATGGG TGTGGGCCTG TACGGGTCGA TCTACCTGTT GCCGCTGTAC
CTGGCGCAGG TGCAGGGCTA CAACGCCTTG CAGATTGGCG AGGTGATCAT GTGGATGGGT
ATTCCGCAGC TGTTCCTGAT CCCCTTGGTG CCGCAACTGA TGAAGGTGGT GTCACCCAAG
GTGTTGTGCG CGTTGGGGTT CTGCCTGTTC GGGGCTGCCA GTTTCGGCTC TGGGGTGCTC
AACCCGGACT TTGCCGGGCC GCAGTTCAAC CACATCCAGA TCATCCGCGC CCTGGGTCAA
CCGATGATCA TGGTGACCAT TTCGCTGATC GCCACAGCGT ATATCCAGCC GCAGGATGCA
GGGTCGGCGT CGAGCTTGTT CAATATCCTG CGTAACCTGG GCGGGGCCAT CGGCATTGCC
CTGCTGGCCA CCCTGCTGGA TGCGCGGACC AAGGTGTATT TCGACTACCT TCGCGAATCG
GTGGTGCCGA GCAACCCCCA GGTAGCGGAA AGGCTGGCGC AACTGGCGGA GCGCTTGGGC
AATGACAACG CGGCGCTGGG CAAGCTGAGC GAGATTACCC ACCAGCAGGC CATGATCATG
GCTTACAACG ATGCGTTCCA TTTTGTCGGG ATAGGCTTGG CGGTAAGCAT GGTGGCGGTG
TTGCTGACCC GGAAGTTGCC GGAAGGGTTG AAAGCCGGGG AAGCACATTA A
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| Protein sequence | MAGDTLLRPT AEPTRRDWIA VMSVMLGAFM AVLDIQITNS SLKDIQGALS ATLEEGSWIS
TSYLVAEIIM IPLTAWLVQL LSARRLAVWV SGGFLLSSLL CSMAWNLESM ILFRALQGFT
GGALIPLAFT LTLIKLPEHH RAKGMAMFAM TATFAPSIGP TLGGWLTENW GWEYIFYINI
PPGLVMIAGL MYGLEKKEAH WELLKSTDYA GIVTLGLGLG CLQVFLEEGH RKDWLESNLI
VGLGSVALVS LITFVILQFS KPHPLINLRI LGNRNFGLSS IASLGMGVGL YGSIYLLPLY
LAQVQGYNAL QIGEVIMWMG IPQLFLIPLV PQLMKVVSPK VLCALGFCLF GAASFGSGVL
NPDFAGPQFN HIQIIRALGQ PMIMVTISLI ATAYIQPQDA GSASSLFNIL RNLGGAIGIA
LLATLLDART KVYFDYLRES VVPSNPQVAE RLAQLAERLG NDNAALGKLS EITHQQAMIM
AYNDAFHFVG IGLAVSMVAV LLTRKLPEGL KAGEAH
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