| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1496 |
|---|
| Symbol | |
|---|
| ID | 5869265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1679177 |
|---|
| End bp | 1680163 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641546603 |
|---|
| Product | DNA polymerase III subunit delta' |
|---|
| Protein accession | YP_001667737 |
|---|
| Protein GI | 167032506 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.312156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGAGG CCTACCCTTG GCAGGAAGCG CTGTGGCAGC AACTGGCTGG GCGCAGCCAG
CACGCCCATG CGTACTTGCT GCACGGGCCC CAAGGCATCG GCAAGCGAGC GTTGGCCGAG
CGCCTGATGG CCCGCCTCAT GTGCCAGCGA CCGCTGGGCT TGGAGGCCTG TGGCGAGTGC
AAGTCGTGCC TGTTGCTCAA GGCTGGCAGC CACCCGGACA ACTTTGTCCT CGAACCCGAG
GAAGCCGACA AACCGATCAA GGTCGACCAG GTCCGTGAGC TGGTGGCCTT CGTGGTGCAG
ACGGCGCAAC TGGGTGGGCG CAAGGTGGTG TTGATCGAGC CGGTGGAAGC GATGAACGTC
AACGCCTCCA ACGCGCTGCT GAAAAGCCTT GAAGAGCCTT CCGGCGATAC CGTGCTGCTG
TTGGTCACGC ATCAGCCAAG TCGCCTGTTG CCAACGATCA AGAGTCGTTG CCAGCAGGTT
GCCTGCCCGC AGCCCAGCCT GGCCCAGAGC CAGGCTTGGC TGGCTGGCGC GTTGCCCGAC
AGTGATGAGG CTGAGCGCGA TGAGCTGCTG ACCCTGGCCG CCGGTTCGCC ATTGATGGCG
GTTAGCCTGC AGGCTCAGGG TGTGCGCGAG CAACGCGCGC TGGTTACCGA CGGGGTGAAG
AAGCTGCTCA AGCAGCAGCA ATCGCCCAGC CAGTTGGCCG ACGCCTGGAA CGCTGTACCG
TTGTTGCGGC TGTTCGACTG GTTCTGCGAT TGGGCGCACC TGATCCTGCG CTACCAGTTG
ACCCAGGACG AGGAGGGGTT AGGCTTGGCG GATATGCGCA AGGTGGTGCA ATACCTTGCG
CAGAAGAGCC GTCAGGCCAA GGTGCTGGAG GTGCAGGCGT GGATCCTTGA GCAGCGCCAG
AAGGTGCTGG GCAAGGCCAA CCTCAACCGT GCCCTGCTGC TTGAATCGCT GCTGGCCCAC
TGGCTGCAAC TGCCCGGCGC CCGCTGA
|
|---|
| Protein sequence | MAEAYPWQEA LWQQLAGRSQ HAHAYLLHGP QGIGKRALAE RLMARLMCQR PLGLEACGEC
KSCLLLKAGS HPDNFVLEPE EADKPIKVDQ VRELVAFVVQ TAQLGGRKVV LIEPVEAMNV
NASNALLKSL EEPSGDTVLL LVTHQPSRLL PTIKSRCQQV ACPQPSLAQS QAWLAGALPD
SDEAERDELL TLAAGSPLMA VSLQAQGVRE QRALVTDGVK KLLKQQQSPS QLADAWNAVP
LLRLFDWFCD WAHLILRYQL TQDEEGLGLA DMRKVVQYLA QKSRQAKVLE VQAWILEQRQ
KVLGKANLNR ALLLESLLAH WLQLPGAR
|
|---|
| |