Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1468 |
Symbol | fadE |
ID | 5869237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1650971 |
End bp | 1653418 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546575 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001667709 |
Protein GI | 167032478 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.890646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTGT TGTGGTTGGT AGTGCTGGTG ATCGGCGCGG CATACCTCAC GCATCGGCGC CTGGCGCCCT TGCAGATTCT GGGCATCATG GCGGCCTACG TGCTGCTGAT GGGCATTTTC AGCAGTGCAC CCGGCTGGTT GCTGACCCTG ATCTGGGGGG TACTGGCCTT GAAAATCGCC CTGGTTGCGC TCCCGGACTG GCGCCGCAAG GTGTTCACCG GGCCGGTTTT CAACTGGTTC CAGCGTACCT TGCCGCCCAT GTCGCAAACC GAGCGCGAAG CGATCGATGC CGGCACGGTG TGGTGGGACG GCGAACTGTT CAGCGGCCGC CCCGACTGGC GTACCTTGCT GGCCTACCCG GCACCGAAAC TGACCGACGA AGAACAGGCC TTCATCGACG GCCCCACTGA AGCGCTGTGC GCCATGGTCA GCGACTGGCA GATCGGTCAG GACCTGGACC TGCCACCCGA AGCCTGGGGT CACATCAAGC AGCATGGCTT CTTCGCCCTG ATCATCCCCA AGGAATACGG CGGCAAAGGC TTTTCGGCCT ACGCTCATTC CCAGGTGGCG ATGAAACTGG CCACCCGCAG CGGCGATCTC GCCTCCACGG TGATGGTGCC CAACTCGCTC GGCCCGGCCG AATTGCTGCT GCATTACGGC ACCGACGAAC AACGCAACCA TTACCTGCCA CGCCTTGCCC GCGGCGACGA GATCCCCTGC TTTGCCCTGA CCGGCCCGTT GGCCGGCTCC GATGCCGGCG CCATGCCCGA CACCGGCATC ATCTGCAAAG GCCAGTGGAA CGGCGAAGAA GTGCTGGGCC TGCGGCTGAA CTGGGAAAAG CGCTATATCA CCCTGGGCCC GGTCGCGACC TTGCTGGGCC TGGCCTTCAA AGCCTACGAC CCGGACCACC TGTTGGGCGA CGAGCAGGAG CTGGGCATCA GCCTGGCCTT GATCCCCACC GACACGCCCG GTGTCGAAAT CGGCAAGCGC CACCTGCCGC TGGGGGCCGC CTTCATGAAC GGCCCCAACA GCGGCAAGGA CGTGTTCGTG CCGCTGGACT TCCTGATCGG TGGGCAGGCC ATGCTCGGCA AGGGCTGGAT GATGCTGATG AACTGCCTGT CGGTAGGCCG TTCGATTTCC CTGCCTGCGG TCGGCACCGG CGCGGCCAAG TACACCAGCC TGGTCACCGG CCAGTACGCC AATATCCGCG AACAGTTCAA CGTGCCACTG GCCGCTTTCG AAGGCATCCA GGAATCGCTG GCACGCATTG GCGGCAACGC CTGGCTGATG GACAGCGCCC GCCTGCTGAC CGCCAAGGCC GTGGACCTCG GTGAAAAGCC TTCGGTGCTG TCGGCGATTC TGAAGTACCA CCTCACCGAG CGCGGCCGCG AATGCATCCA GCACGCCATG GACGTGCACG GCGGCAAGGC CATCATCATG GGGCCGAACA ACTACCTGGG GCGCAACTGG CAAGGGGCAC CGATCTTCAT CACGGTCGAA GGCGCCAACA TCCTTTCGCG CAACCTGATG ATCTTCGGCC AGGGCGCCAT CCGCTGCCAT CCGTTCGTGC TCAAGGAAAT GGCTTTGGTC GGCCGTGAGG ACCGTGACCA GGCGCTGCGG GAGTTCGACG AGCTACTGAT GAGGCACATC ATGTTCGCCG CCGGCAACGC GGCCAGCACG TTGGTGTTCA ACCTGGGGCT AGGGCGCTTC GAGTCGGTAC CGGGTGATGC ATTGAGCCAA GGGTATTTCC GCGCCCTCAA CCGCCAGGCT GCCGCTTTCG CCCTGCTGGC CGACCTGTCG ATGATGCTGC TGGGTGGCGC GCTCAAGCGC CGCGAACGCC TGAGTGCGCG CCTGGGCGAT GTGCTCAGCT ACCTGTACCT GTCCAGCGCC GCGCTCAAGC GCTACCACGA CCTGGGCTCA CCCGAGCACA TGCAGCCACT GCTGCGCTGG GCCATGGAAG AAAGCCTGGG CCAGGCGGAA AAGGCGCTGG ACCGGCTGCT CGACAACTTC CCCAACCGAT TTGTCGGTTG TGTTCTGCGC GTGCTGGTGT TCCCCTTCGG CCGCCGCCAT ACCGGGCCGA GCGATGAGCT GGATGCCGAA GTGGCGGCGC TGATCGGCCG CAGCAAGGGC GACCCGGCGC TGGAGGAATT GCTCGCCGGC TGCTTCCGAC CCCAGGCCGA GGGTGACCCG GTGGCAGCAT TGCAACGGGC CTGCAACCTA CTAGACGAGA CTGCGCCACT GCACAAAGTG CTGCATCAGG CGCTTAAGGA GGGCAAGGTA CAGCCGGCAC CTGGGCAGTC GGCCATCGAT GCGGCAGTCC AGAGTGGTGC ATTACAGGCT GACGAGGGTC AACGCTTACA GGCGGCGGAG CAGGCACGCC GGGCAGTGAT CGATGTGGAT GCCTTCGACA AGGCGCAACT GCTTCCGGAG CAGGGCAAGG TGCGATGA
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Protein sequence | MLLLWLVVLV IGAAYLTHRR LAPLQILGIM AAYVLLMGIF SSAPGWLLTL IWGVLALKIA LVALPDWRRK VFTGPVFNWF QRTLPPMSQT EREAIDAGTV WWDGELFSGR PDWRTLLAYP APKLTDEEQA FIDGPTEALC AMVSDWQIGQ DLDLPPEAWG HIKQHGFFAL IIPKEYGGKG FSAYAHSQVA MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRNHYLP RLARGDEIPC FALTGPLAGS DAGAMPDTGI ICKGQWNGEE VLGLRLNWEK RYITLGPVAT LLGLAFKAYD PDHLLGDEQE LGISLALIPT DTPGVEIGKR HLPLGAAFMN GPNSGKDVFV PLDFLIGGQA MLGKGWMMLM NCLSVGRSIS LPAVGTGAAK YTSLVTGQYA NIREQFNVPL AAFEGIQESL ARIGGNAWLM DSARLLTAKA VDLGEKPSVL SAILKYHLTE RGRECIQHAM DVHGGKAIIM GPNNYLGRNW QGAPIFITVE GANILSRNLM IFGQGAIRCH PFVLKEMALV GREDRDQALR EFDELLMRHI MFAAGNAAST LVFNLGLGRF ESVPGDALSQ GYFRALNRQA AAFALLADLS MMLLGGALKR RERLSARLGD VLSYLYLSSA ALKRYHDLGS PEHMQPLLRW AMEESLGQAE KALDRLLDNF PNRFVGCVLR VLVFPFGRRH TGPSDELDAE VAALIGRSKG DPALEELLAG CFRPQAEGDP VAALQRACNL LDETAPLHKV LHQALKEGKV QPAPGQSAID AAVQSGALQA DEGQRLQAAE QARRAVIDVD AFDKAQLLPE QGKVR
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