Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1447 |
Symbol | |
ID | 5869212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1615601 |
End bp | 1616812 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546551 |
Product | aminotransferase AlaT |
Protein accession | YP_001667690 |
Protein GI | 167032459 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0541953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.418968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCA GCAAATCGAA CAAGCTCGCC AATGTCTGCT ACGACATTCG CGGCCCAGTG CTCAAGCACG CCAAACGTCT GGAAGAGGAA GGCCACCGCA TCCTCAAGCT GAACATCGGC AACCCGGCGC CGTTTGGCTT CGAGGCGCCC GATGAAATCC TCCAGGATGT GATCCGCAAC CTGCCCACCG CCCAGGGCTA CAGTGACTCC AAGGGCCTGT TCAGCGCGCG CAAGGCGGTG ATGCAGTACT GCCAGCAAAA GGAAATCGAA GGCGTCACCA TCGAGGACAT CTACCTCGGC AACGGTGTGT CCGAGCTGAT CGTCATGTCG ATGCAGGCGC TGCTGAACAA CGGCGACGAA GTGCTGATCC CGGCCCCCGA CTACCCGCTG TGGACCGCCG CCGTGAGCCT GGCGGGCGGC AAGCCGGTGC ATTACCTGTG CGACGAGCAA GCCGACTGGT TCCCCGACCT TGAAGACATC AAGGCCAAGA TCACCCCGAA CACCAAGGCC CTGGTGATCA TCAACCCGAA CAACCCGACC GGCGCCGTCT ACTCCAAAGA GCTGCTGCTG GGCATGCTGG AGCTGGCCCG CCAGCACAAC CTGGTGGTGT TCTCCGACGA GATCTACGAC AAGATCCTGT ACGACGAAGC GGTGCACATC AGCACCGCCT CGCTGGCACC CGACCTGCTG TGCCTGACTT TCAACGGCCT GTCCAAGTCG TACCGAGTGG CGGGCTTCCG TTCCGGCTGG CTGATCATCT CCGGGCCGAA GCACCACGCC CAGAGCTATA TCGAAGGCAT CGACATGCTG GCCAACATGC GCCTGTGCGC CAACGTGCCG GCCCAGCATG CCATCCAGAC CGCGTTGGGT GGCTACCAGA GCATCAACGA CCTGGTATTG CCGCCAGGCC GCTTGCTAGA ACAGCGCAAC CGCACCTACG AGCTGCTCAA CGATATCCCG GGGGTGAGCT GTGTGAAGCC GATGGGTGCG CTGTATGCAT TCCCGCGCAT CGACCCGAAG GTGTGCCCGA TCCTCAACGA CGAGAAGTTC GCCCTTGACC TGCTGCTGTC GGAAAAACTG CTGATCGTGC AAGGTACGGC GTTCAACTGG CCGTGGCCGG ACCACTTCCG CGTGGTCACC TTGCCTCGGG TGGACGACCT GGAAGCGGCG ATTGGCCGGA TTGGCAATTT CCTGAAGGGG TATTCGCAGT AA
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Protein sequence | MQFSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN LPTAQGYSDS KGLFSARKAV MQYCQQKEIE GVTIEDIYLG NGVSELIVMS MQALLNNGDE VLIPAPDYPL WTAAVSLAGG KPVHYLCDEQ ADWFPDLEDI KAKITPNTKA LVIINPNNPT GAVYSKELLL GMLELARQHN LVVFSDEIYD KILYDEAVHI STASLAPDLL CLTFNGLSKS YRVAGFRSGW LIISGPKHHA QSYIEGIDML ANMRLCANVP AQHAIQTALG GYQSINDLVL PPGRLLEQRN RTYELLNDIP GVSCVKPMGA LYAFPRIDPK VCPILNDEKF ALDLLLSEKL LIVQGTAFNW PWPDHFRVVT LPRVDDLEAA IGRIGNFLKG YSQ
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