| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1441 |
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| Symbol | |
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| ID | 5869206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1608459 |
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| End bp | 1609805 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546545 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001667684 |
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| Protein GI | 167032453 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.186993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAC CGTGGAGCCC TGACAGCTGG CGCGCCCTGC CGATCCAGCA GCAACCGACC
TACCCCGATG CCGCGCACCT GCTGAAGGTT GAACAGACCC TGGCCAGCTA CCCGCCGCTG
GTGTTCGCGG GCGAGGCACG CGAGCTGCGC AGGCAGTTTG CCGAGGTGAC CGAAGGCCGT
GCGTTCCTGC TGCAGGGTGG CGATTGCGCC GAGAGCTTCG CCGAGTTCTC GGCGGCGAAA
ATCCGCGACA CCTTCAAGGT GCTGCTGCAA ATGGCCATTG TCATGACCTT TGCCGCTGGC
TGCCCGGTGG TCAAGGTGGG GCGTATGGCC GGGCAGTTTG CCAAACCGCG CTCATCGGGC
GATGAAACCA TCGGCGACAT CACCCTGCCC GCCTACCGAG GCGATATCGT CAATGGCATC
GGCTTTGACG CCAAAAGCCG CATCCCCGAC CCGGAGCGCC TGCTGCAGGC TTATCACCAG
GCCACCGCCA GCCTCAACCT GCTGCGCGCT TTCGCCCAGG GCGGGTTTGC CGACCTGCAC
CAGGTGCACA AGTGGAACCT GGACTTCATC GCCAACTCGG CGCTGGCCGA CAAGTACCAC
CAGCTGGCCA ACCGCATCGA TGAAACCCTG GCTTTCATGC GCGCCTGTGG CCTGGACAGT
GCGCCGCAGC TGCGCGAAAC CAGCTTCTTC ACGGCCCACG AAGCATTGTT GCTGAACTAT
GAAGAAGCCT TCGTGCGTCA GGACAGCCTG ACGGGTGACT ACTACGACTG CTCGGCGCAC
ATGTTGTGGA TCGGCGACCG CACTCGCCAG CTCGACGGCG CCCATGTGGA GTTTCTGCGC
GGCGTGCACA ACCCGATCGG GGTCAAGGTT GGCCCAAGCA TGAACCCAGA AGAGCTGATC
CGCCTGATCG ACACGCTCAA CCCGGCCAAC GACCCTGGGC GCCTGAACCT GATCGTGCGC
ATGGGCGCGA ACAAGGTCGG CGACCACCTG CCGGGGCTGA TCCGCACTGT CGAGCGCGAG
GGGCGCAAGG TGTTGTGGAG CTCGGACCCG ATGCACGGCA ACACCATCAA GGCCAGCAGC
GGCTACAAGA CCCGCGATTT TGCGCAAATT CTGGATGAGG TGAAGCAGTT CTTCCAGGTG
CATCAGGCCG AGGGCAGCCA TGCCGGCGGC ATCCATATCG AGATGACCGG GCAGAACGTC
ACTGAATGCA TCGGCGGTGC ACGGCCGATC ACCGAGGACG CGTTGTCTGA TCGGTACCAC
ACCCATTGCG ACCCGCGGAT GAATGCCGAT CAGTCGCTGG AGTTGGCGTT TTTGATTGCC
GAAACGCTCA AACAGGTGCG GCGCTAA
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| Protein sequence | MNQPWSPDSW RALPIQQQPT YPDAAHLLKV EQTLASYPPL VFAGEARELR RQFAEVTEGR
AFLLQGGDCA ESFAEFSAAK IRDTFKVLLQ MAIVMTFAAG CPVVKVGRMA GQFAKPRSSG
DETIGDITLP AYRGDIVNGI GFDAKSRIPD PERLLQAYHQ ATASLNLLRA FAQGGFADLH
QVHKWNLDFI ANSALADKYH QLANRIDETL AFMRACGLDS APQLRETSFF TAHEALLLNY
EEAFVRQDSL TGDYYDCSAH MLWIGDRTRQ LDGAHVEFLR GVHNPIGVKV GPSMNPEELI
RLIDTLNPAN DPGRLNLIVR MGANKVGDHL PGLIRTVERE GRKVLWSSDP MHGNTIKASS
GYKTRDFAQI LDEVKQFFQV HQAEGSHAGG IHIEMTGQNV TECIGGARPI TEDALSDRYH
THCDPRMNAD QSLELAFLIA ETLKQVRR
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