Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1412 |
Symbol | |
ID | 5869176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1582705 |
End bp | 1583229 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641546515 |
Product | ankyrin |
Protein accession | YP_001667655 |
Protein GI | 167032424 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCC AAACCGCACC CGCCACCATG AACGATGACG AAGCCGCTGC ATTCGCCGAG CAGGTGTTCG AACGTGCCCG TCAGGGCGAC GCCGACATGC TCGGGCGCCT GCTTGCCAGT GGCCTGCCGC CCAACCTGCG CAACCACAAG GGCGACACCC TGCTGATGCT GGCCAGTTAC CATGGCCAGC ATGACGCGGT GCGCGTGTTG CTGGCGCAAG GTGCCGACCC ATTGATTGCC AACGACAACG GCCAACTGCC TATTGCCGGT GCAGCGTTCA AGGGGGATCT GGCGATGATT CGCCTGTTGC TTGAGCACGG TGTGCCAGTG GATGCCGCCG CGCAGGATGG GCGTACCGCG CTGATGTTGG CAGCCATGTT CAACCGCAGC GAAATCATCG ACTACTTGTT GGCCCAGGGC GCCGACCCGG CGCGCCAGGA TGCACGCGGC GCCACGGCGC TGATGGCGGC CCAGACCATG GGCGCGGTGG ACGCCGCCGC ACGCCTGCAA GCGCTGGCCG GCTAA
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Protein sequence | MSSQTAPATM NDDEAAAFAE QVFERARQGD ADMLGRLLAS GLPPNLRNHK GDTLLMLASY HGQHDAVRVL LAQGADPLIA NDNGQLPIAG AAFKGDLAMI RLLLEHGVPV DAAAQDGRTA LMLAAMFNRS EIIDYLLAQG ADPARQDARG ATALMAAQTM GAVDAAARLQ ALAG
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