Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1392 |
Symbol | |
ID | 5869156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1565362 |
End bp | 1565697 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546495 |
Product | helix-hairpin-helix repeat-containing competence protein ComEA |
Protein accession | YP_001667635 |
Protein GI | 167032404 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0637588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAACA ACGTTCTGTC GTACCTGCTG CTGCCACTGT TCGCCAGCCT GTCGTTCTCC CTTAGCGCAG CCCCGGCCAG CGCCCCGTCG GCGCCCGAAG CGGTACCCGT GGTGGCTCAG GCGCAGGCCC AGCAAGCGCC TCGGCTGGAC CTGAACAAGG CCGATGCGCT GACTTTGCAG AAGGAGTTGA ACGGGATAGG AAAGGCCAAG GCCGAAGCCA TCGTGGCCTA CCGCGAGGCC CATGGGCCGT TTGCTTCGGT GGATGAACTG CTGGAGATCA AGGGGATAGG CAATGCCCTG CTGGAGCGGA ATCGTGACAA GGTGATGGTG GAGTAA
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Protein sequence | MRNNVLSYLL LPLFASLSFS LSAAPASAPS APEAVPVVAQ AQAQQAPRLD LNKADALTLQ KELNGIGKAK AEAIVAYREA HGPFASVDEL LEIKGIGNAL LERNRDKVMV E
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