| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1341 |
|---|
| Symbol | |
|---|
| ID | 5869105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1494282 |
|---|
| End bp | 1496027 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641546444 |
|---|
| Product | GNAT family acetyltransferase |
|---|
| Protein accession | YP_001667584 |
|---|
| Protein GI | 167032353 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03103] GNAT-family acetyltransferase TIGR03103 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.21434 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCC ATGAAATCGC TTACGGGCAG CGCCTGCTGC GCGGCCAGGC GCCGTCCTAT
GAGCGCCTGC AGGCGCGCCT GGCCGGCGAC GGCAGCCAGC CCCACGACCA GCCGCGAGCC
GTGCACTGCG GCTGGGGCCG GCTGCTGATC GGCCACACCT ACCCCGACCC GGTTTCGCTG
GCCGAGGACT TGCTCGACGA ATGCCCCGGC GAGCGCGATA TCGCCCTGTA CGTGGCCGCG
CCCCAGCAAT TGCTGGCCCA GGCCCCACAG CAGTTGTTCC TGGACCCGTC CGACACCTTG
CGCCTGTGGT TCACCGACTA CCGCCCGGCG CAGCGGGTGT TCCGCGGCTT CCGCGTGCGC
CGGGCGCAGA ACCCCGCCGA CTGGCAGGCG ATCAACACCC TGTACCAGGC ACGCAGCATG
CTGCCGGTGG ACGCCGAACT ACTGACCCCT CGGCACCTGG GCGGCCCGGT GTACTGGCTG
GCCGAAGACG AAGACAGCGG CGCTGTGATC GGCAGCGTCA TGGGCCTGAA CCACGCCAAG
GCGTTCGATG ACCCTGAGCA TGGCAGCAGC CTGTGGTGCC TGGCCGTGGA CCCGCACTGC
ACCCGCCCAG GCGTGGGTGA GGTGCTGGTG CGCCACCTGA TCGAGCACTT CATGAGCCGG
GGCCTGGCCT ACCTCGACCT GTCGGTGCTG CACGACAACC GCCAGGCCAA GCGCCTGTAC
CAGAAGCTGG GCTTTCGCAA CCTGCCCACC TTTGCGGTCA AGCGCAAAAA TGGCATCAAC
GAGCAGTTGT TCCTCGGGCC CGGGCCGCAA GCCGACCTTA ACCCCTATGC CCGCATCATC
GTCGACGAGG CGTTGCGCCG GGGCATCGAA GTACAGGTGG ATGACGCCGC TGGCGGCCTG
TTCACGCTGA GCCTGGGTGG GCGGCGCATT CGCTGCCGTG AATCGCTCAG CGACCTGACC
AGTGCCGTGA CCATGACCCT GTGCCAAGAC AAGCGCCTGA CCCAGCACGC CCTGCACAAC
GCTGGGCTGC AGGTGCCGGC GCAGCAACTG GCGGGCAATG CCGACGACAA CCTGGCGTTT
CTCGACGAGC ATGGCGCAGT CGTGGTCAAG CCGGTCGACG GTGAGCAAGG CCAGGGCGTG
GCGGTGAACC TGACCTGCAT CGACGACATC ACCCGCGCCG TGGCGCACGC CCGCCAGTTC
GACAGCCGCG TGTTGCTGGA AAGCTTCCAT GCCGGCTTCG ACCTGCGCAT CGTGGTGATC
GGCTACGAAG TGGTGGCCGC CGCCATCCGT CACCCGGCGC AGGTGCTGGG CGATGGCAAG
CACAGTGTGC GCCAGTTGAT CGAGGCCCAG AGCCGCCGGC GCCAGGCCGC CACCAGTGGC
GAAAGCCGCA TCCCGCTGGA CGACGAAACC GAGCGCACCT TGCGCGCGGC GGGCTTGGGC
TATGACGACG TGCTGCCTGC CGGCCAGCGT CTGGCCGTGC GGCGCACCGC CAATCTGCAC
ACCGGCGGCA CCCTGGAAGA CGTCACCGAG CGCCTGCACC CGGTACTGGC CGACGCTGCT
GTGCGCGCTG CTCGGGCGCT GGAAATTCCG GTGGTGGGGC TGGACTTCAT GGTGCGTGAC
GCCGGGCAGC CGGAGTACGT GATCATCGAG GCCAACGAAC GTGCCGGCCT GGCCAACCAT
GAACCGCAGC CAACGGCCGA GCGCTTTATC GACTTGCTGT TTCCGCATAG CCGACCTTTG
GCCTGA
|
|---|
| Protein sequence | MKAHEIAYGQ RLLRGQAPSY ERLQARLAGD GSQPHDQPRA VHCGWGRLLI GHTYPDPVSL
AEDLLDECPG ERDIALYVAA PQQLLAQAPQ QLFLDPSDTL RLWFTDYRPA QRVFRGFRVR
RAQNPADWQA INTLYQARSM LPVDAELLTP RHLGGPVYWL AEDEDSGAVI GSVMGLNHAK
AFDDPEHGSS LWCLAVDPHC TRPGVGEVLV RHLIEHFMSR GLAYLDLSVL HDNRQAKRLY
QKLGFRNLPT FAVKRKNGIN EQLFLGPGPQ ADLNPYARII VDEALRRGIE VQVDDAAGGL
FTLSLGGRRI RCRESLSDLT SAVTMTLCQD KRLTQHALHN AGLQVPAQQL AGNADDNLAF
LDEHGAVVVK PVDGEQGQGV AVNLTCIDDI TRAVAHARQF DSRVLLESFH AGFDLRIVVI
GYEVVAAAIR HPAQVLGDGK HSVRQLIEAQ SRRRQAATSG ESRIPLDDET ERTLRAAGLG
YDDVLPAGQR LAVRRTANLH TGGTLEDVTE RLHPVLADAA VRAARALEIP VVGLDFMVRD
AGQPEYVIIE ANERAGLANH EPQPTAERFI DLLFPHSRPL A
|
|---|
| |