Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1328 |
Symbol | |
ID | 5869092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1482169 |
End bp | 1483317 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641546431 |
Product | patatin |
Protein accession | YP_001667571 |
Protein GI | 167032340 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCAC CCCCGGTAAC CGGTCTTATC CTTTCTGGCG GCGGCGCCCG CGCCGCCTAT CAGGTTGGCG TCCTTGCCGG CATTGCCGAG TTGCTGCCTG CCGGCGCACA TAATCCGTTC CCGGTCATTG TCGGTACCTC TGCCGGTGCC ATCAACGCCG TTACCCTGGC CAGCGGCGCC ACTCATTTCA ACGAGGCCGT GCAACGGCTT ACTGCCTTCT GGCAGAACTT TCGCAGCCAT CTGGTCATAC GCAGTGACTG GCCCGGAGTC GTTCGCCAAG CCAGCCGTTT CGTTGGCCAT AGCCTGCTGG GCCTGGGTGG CCAGGCGCCG GTGGCGCTGC TGGACAGCAG CCCACTGCGC AGCCTGCTGG AGGCACACTT GAACATGGAT GGTATCGGCC ATTCTCTGGC GGCCGAGCAG TTGCGCGCCG TGGCCGTCAC CGCCTTCGGC TACGAGTCCG GCCAGGCGGT CACCTTCTAC CAAGGGCGCG GCACCATCGA AGCCTGGCTG CGCCATCGCC GCATCGGCGT GCCCACGCCG TTGACCATCG ACCACCTGCT GGCCAGCGCG GCCATTCCGC TGCTGTTTGC CCCGGTGCAG TTGGGCGACG AATATTACGG TGACGGTGCG GTGCGCCAGT CGGCGCCGAT CAGCCCGGCC CTGCACCTGG GCGCCAGCCG GGTGCTGGTG GTCGGGGTCA GCGGCAACCC GCAGCGGCCG GCACCGCCGT TGCCCACTCA GCGCGTGTTC AGTGGCCAGC AGCCGAGCCT GGCGCAGATC GGTGGGCACA TGCTCAACAG CACGTTCATC GACAGCCTGG AAGACGACAT CGAGTTGCTG CAGCGGCTCA ACCACCTGAG CCGCTTGCTG CCAGCGCACT TGGATGCCCG GCGCCTGGGG CTGGCGCCGG TCGAGGTGCT GGTCGTGGCG CCCAGCCAGC CGCTGGACGA AATCGCCGCC CGGCACCGGC GTGAGCTGCC GGCGGCGTTG CGCTTGTTCC TGCGCGGGCC GGGGGCTACG CGGACCAGTG GAGCGGGGGT GTTGAGCTAT CTGCTGTTCG AGGCGAGTTA TTGCAGTGAA CTGATCGAGT TGGGGCGACG GGATGCTTTG GCCAAGAAGC GGGAGTTGTG TCAGTTCCTG GGGATTTGA
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Protein sequence | MAPPPVTGLI LSGGGARAAY QVGVLAGIAE LLPAGAHNPF PVIVGTSAGA INAVTLASGA THFNEAVQRL TAFWQNFRSH LVIRSDWPGV VRQASRFVGH SLLGLGGQAP VALLDSSPLR SLLEAHLNMD GIGHSLAAEQ LRAVAVTAFG YESGQAVTFY QGRGTIEAWL RHRRIGVPTP LTIDHLLASA AIPLLFAPVQ LGDEYYGDGA VRQSAPISPA LHLGASRVLV VGVSGNPQRP APPLPTQRVF SGQQPSLAQI GGHMLNSTFI DSLEDDIELL QRLNHLSRLL PAHLDARRLG LAPVEVLVVA PSQPLDEIAA RHRRELPAAL RLFLRGPGAT RTSGAGVLSY LLFEASYCSE LIELGRRDAL AKKRELCQFL GI
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