| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1319 |
|---|
| Symbol | |
|---|
| ID | 5869083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1473772 |
|---|
| End bp | 1474485 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641546422 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001667562 |
|---|
| Protein GI | 167032331 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.966684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCGA TGCCACCGCG AGCGGTAACA GCCATCTGCC ATGCCCTGCA GGAGCAGATC
GAGCACGGCC TGTTGGCGCC GGGCGGCAAG CTGCCGGCCG AGCGCCGGCT CAGCGAGGTG
TTCGACACCA CGCGTATCAC CCTGCGCGAG GCGCTAGCCC AGCTGGAGGC CCAGGGCTTG
ATCTACCGCG AAGAGCGCCG CGGCTGGTTT GTCGCGCCCG AGCGGTTGAC CTACGACCTG
ATCGAGCGCA GTCACTTCCA TGCCATGGTG CGCGAGCAGG GTCGGGTGGC CAGTACCGAA
CTGCTGTCGG CGCGGCTGCA GCCGGCTTCG GCGGCCATCT GCGCGCGCTT GCAGTTGCCG
GCGTTGTCCA GCGTGGTGCT TATCTGCCGC TTGCGGCGGA TTGACGGGCG GGCGGTGCTG
TATGCCGAGC ACTACCTCAA CCCCCGGTAT TTCCCGGAGA TTCTCGAACA GGATCTGGCG
CAGTCGCTGA CGGAGATTTA TGGGCGAGTG TATGGCATCG AGTATGGGCA GGTGTGCTTT
GAAATTTTGC CGACGGCGTT GCCGGTGGAG GCGGCGGGGG CGTTGAAGGT GTCGGTGGGT
AGCCCGGGGT TGCACATCAC TCGGGTCAAC AGCGACCAGC ATGGGCACCT GATCGACTGT
GACCTGGAGT ACTGGCGGCA TGATGCCATC CGCATCCGCG CCCTGGCTGG CTAG
|
|---|
| Protein sequence | MQPMPPRAVT AICHALQEQI EHGLLAPGGK LPAERRLSEV FDTTRITLRE ALAQLEAQGL
IYREERRGWF VAPERLTYDL IERSHFHAMV REQGRVASTE LLSARLQPAS AAICARLQLP
ALSSVVLICR LRRIDGRAVL YAEHYLNPRY FPEILEQDLA QSLTEIYGRV YGIEYGQVCF
EILPTALPVE AAGALKVSVG SPGLHITRVN SDQHGHLIDC DLEYWRHDAI RIRALAG
|
|---|
| |