Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1300 |
Symbol | rdgC |
ID | 5869060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1450268 |
End bp | 1451188 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546399 |
Product | recombination associated protein |
Protein accession | YP_001667543 |
Protein GI | 167032312 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2974] DNA recombination-dependent growth factor C |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTTCA AGAACCTGCT GACCTACCGC CTGACCCAGG AAGTTCCGTT CGAGCCTGAA GCGTTGGAAG CCGCCCTGGC CAGCAAGCCG GCCCGCCCAT GCGCCAGCCA GGAGCTGACC ACCTACGGTT TCGTCGCGCC GTTCGGCAAA GGCGAAGACG CTCCCCTGGT GCATGTCAGC GGCGAGTACC TGCTGATTGC CGCACGCAAG GAAGAACGCA TCCTGCCTAG CAGCGTGGTC AACGACGCGG TCAAGGAAAA GGTCGAAGAG ATCGAGACCG AGCAAATGCG CAAGGTCTAT AAAAAGGAAC GCGACCAGAT CAAGGACGAG ATCATCCAGG CCTTCCTGCC GCGCGCGTTC ATCCGCCGCT CGATGATCTT CGCCGCCATC GCCCCGCGCC TGGGCGTGAT TCTGGTCAAC TCGGCCAGCG CCAAGCGTGC CGAAGACCTG TTGTCGACCC TGCGTGAAGT GATGGGCTCG CTGCCGGTGC GCCCTGCCAC GGTAAAAGTT GCACCGGTTG CCACCATGAC CGACTGGGTC AAGTCGCAGC AAGCCGCCGA AGGCTTCCAT GTGCTGGACG AATGCGAGCT GCGCGACACG GCCGAAGACG GCGGTATCGT GCGCTGCAAG CGCCAGGACC TGACGGGCGA GGAAATCCAG CTGCACCTGA GCACTGGCAA GGTAGTGACC CAGCTGGCCC TGGCCTGGCA GGACAAGCTG TCGTTCATTC TCGACGACAA GATGGTCATC AAGCGCCTGA AGTTCGAAGA GCTGCTGCAA GAGCAAGCCG AGCAGGACGG TGGCGATGAA GCTGCGCAGC AGTTCGATGC CAGCTTCCAG CTGATGATGA TGACCTTTGC CGAGTTCCTG CCGGTGCTGT TCGAGGCACT GGGTGGAGAA GAGATTCCGC AAGGGGTCTG A
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Protein sequence | MWFKNLLTYR LTQEVPFEPE ALEAALASKP ARPCASQELT TYGFVAPFGK GEDAPLVHVS GEYLLIAARK EERILPSSVV NDAVKEKVEE IETEQMRKVY KKERDQIKDE IIQAFLPRAF IRRSMIFAAI APRLGVILVN SASAKRAEDL LSTLREVMGS LPVRPATVKV APVATMTDWV KSQQAAEGFH VLDECELRDT AEDGGIVRCK RQDLTGEEIQ LHLSTGKVVT QLALAWQDKL SFILDDKMVI KRLKFEELLQ EQAEQDGGDE AAQQFDASFQ LMMMTFAEFL PVLFEALGGE EIPQGV
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