Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1280 |
Symbol | cobS |
ID | 5869040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1428808 |
End bp | 1429530 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546379 |
Product | cobalamin synthase |
Protein accession | YP_001667523 |
Protein GI | 167032292 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.713498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCTT TCTTGATCGC CTTGCAGTTT CTCAGCAGCC TGCCGGTGAG CTTGCCGGGC ATGCCGGCAG CGCGTGAGGT GGGGCGTTCG CTGCTGTACT ACCCGCTGGT CGGGCTATTG TTCGGGCTGC TGTTGTGGTT GGCCAGCCAT CTGCTGCAAG GTACACCGGC GCCGCTGCAT GCGGCGTTGC TGCTGACAGC GTGGGTGCTG CTCAGTGGCG CCTTGCACCT GGATGGCCTG GCGGACAGCG CAGACGCCTG GTTGGGTGGC TTCGGCGACC GTGAACGCAC CCTGCAGATC ATGAAGGACC CGCGCAGCGG GCCGATTGCC GTGGTCACCC TGGTGCTGGT GCTGTTGTTG AAGTTTTGCG CCTTATGGGT GCTGGTCGAG CAGGGTGTCG GGGCGCAATT GCTGCTGGCG CCGTTGATCG GGCGAACGGC AATGTTGGGG TTGTTCCTTT GCACGCCGTA TGTGCGCCCC GGTGGGTTGG GGCAGGCGCT GGCCGAACAT CTGCCCCGGC GTGCTGCCGG GTGGGTGTTG CTGTGTTGTG CGCTTTTCTG CCTGCTCTTG GGCGGATGGG TAGTGCTGCT GGCGGTGGCG GTGTTTGCCT GGCTGCGACA TCTGATGTAC CGACGGCTGG GTGGGGCCAC TGGGGATACT GCCGGCGCGC TGCTCGAGTT ACTCGAATTG GCGGTGGTGC TGGGGTTGGC CTTGGGCCTC TGA
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Protein sequence | MLPFLIALQF LSSLPVSLPG MPAAREVGRS LLYYPLVGLL FGLLLWLASH LLQGTPAPLH AALLLTAWVL LSGALHLDGL ADSADAWLGG FGDRERTLQI MKDPRSGPIA VVTLVLVLLL KFCALWVLVE QGVGAQLLLA PLIGRTAMLG LFLCTPYVRP GGLGQALAEH LPRRAAGWVL LCCALFCLLL GGWVVLLAVA VFAWLRHLMY RRLGGATGDT AGALLELLEL AVVLGLALGL
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