Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1236 |
Symbol | |
ID | 5868996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1386447 |
End bp | 1387157 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546335 |
Product | DTW domain-containing protein |
Protein accession | YP_001667479 |
Protein GI | 167032248 |
COG category | [S] Function unknown |
COG ID | [COG3148] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000000000731638 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCATG CGGTAGCGCG CCTGCGCGCC GAACGCCTGG CCCGCAGCAA CAAGCCTTTC ATCGCCCGTG GCTCGCGAGC AGAGCGTTGC CCGGATTGCC GGGTCATCGC TACCCATTGC CTGTGTGCCT GGAAGCCCCG GGTGAAGGCT GACGCCGGTG TATGCCTGCT GATGCATGAC ACCGAGCCGC TGAAGCCCAC CAACACCGGC TGGCTGATTG CCGACCTGAT CGAAGACACC GCGGCCTTCG GCTGGTTGCG CACCTCGGTT GACGAGCGCC TGCTGGCCTT GCTCGACGAC CCGCGCTGGC AGCCCTATAT CGTTTTCCCG GGCGAGTTCG TTGCTCAGGA GCGGGTGGTC AGCGAGGTGG TGCGCGAGCC TGGCAAGCGC CCGCTGTTCA TCCTGTTGGA TGCCACCTGG ACCGAAGCAC GCAAGATGTT CCGCAAAAGC CCGTACCTGG ACCGTTTTCC GGTGCTGAGC CTGCAGGCCG AACAGATGTC GCGCTACCGC TTGCGTCGCT CCAAGCGCGA CGATCATTTC TGCACGGCGG AAGTCGCGGC CATGTGCCTG GACCTGGCCG GCGACAGCCA GGCCTCCCAG GCGCTGGATG CGTACCTGGA TGTGTTCAGC CTGCATTACC TGAGCGGCAA GCAGCGCCTG CCGCTGGACG AGCAGGACGA CACCCACCAA CGTTTGCATA CCTTCCTATA G
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Protein sequence | MSHAVARLRA ERLARSNKPF IARGSRAERC PDCRVIATHC LCAWKPRVKA DAGVCLLMHD TEPLKPTNTG WLIADLIEDT AAFGWLRTSV DERLLALLDD PRWQPYIVFP GEFVAQERVV SEVVREPGKR PLFILLDATW TEARKMFRKS PYLDRFPVLS LQAEQMSRYR LRRSKRDDHF CTAEVAAMCL DLAGDSQASQ ALDAYLDVFS LHYLSGKQRL PLDEQDDTHQ RLHTFL
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